GT6438

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

semi-sterile

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT6438

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 1550317 [Map]; Strand: c
- AT3G05400.1 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: intron1 (CDS)
- AT3G05400.2 - [+] show detail - Major facilitator superfamily protein
  Distance: 0; Region: intron1 (CDS)

NCCTTANTNN NNGGGCCTNG AACTCTATAT ACATAATGAA GTTATAAACT 
CTTACTTTAA TACAATTACT TGAATTTTTT TTAACCTTTA CTGTGGTTAG 
AAACTTGAAA TTTAAAAGAG ATGTCGAGAT AAGATATGGC TATAGGTAGC 
ACGTACTATC AATCCAACAT TTTCGAGGTC CACAAGATTG AAGATATGAA 
GAGATAATAT ATAGTATAGA AACTATATTA TTACCTTTTT CATCTTTTGT 
CAATATATAT AAACTTAGCT TTTAATTCGA AATTAAGTAT TACAAATCTG 
AGGCCAAAAA TCATCATGGT TTTGATTATC TGCGTTAAAA TAATTTCTAA 
ACAACAATCT TGTTGAAAGA CAATAAAGTT TAGTATATAA CATTAATGCT 
AAANAAAAGA AGTTGGTGGT TTGAATCTGT TCCTTAGCTC ATTATACCTC 
TGGCCTAGAT CTGGAATTTG GTTCTAATTA ATAGGAACAT CTATATGAGA 
GTGCATATAT AGAGAAGAAA TAGAGAGCTA GAGAGAGAGA GAGAGATGGG 
TTCATACGGC AGCGCCAANN GTGANGGAGG CAGANACAAT GATGANGGTG 
GAGAAGATAA NANGTGGAGT TGTATTTGCN CTGTCTNCCT TTTTTGCCAA 
TAACATCCTT TCTCCATATT ATTCTCNCCN CCCATTTTCT TCAATCNCAC 
CCTATTTNAG ACCAGANCNN AGAGATACNT NTCGCGTGAA GTAAAATGTT 
TTCTCTCNCT CCNCCCTATG ATNTATAAAA CTNCCCNCCT ACTATAATNC 
CTGGGGATTG GTTCCCCCCN AGAAGGAAAT AAATNTCCCG CTNATGTTGT 
TGATTTAA

AT3G05400.1

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Computational Description: Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G27350.1); Has 24275 Blast hits to 23828 proteins in 1815 species: Archae - 445; Bacteria - 9241; Metazoa - 4940; Fungi - 6177; Plants - 2315; Viruses - 0; Other Eukaryotes - 1157 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G05400.2

Model type: Protein coding
Short Description: Major facilitator superfamily protein
Computational Description: Major facilitator superfamily protein; FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT5G27350.1).
Link: InterPro Scan - TAIR