GT6440

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

semi-sterile
tiny plants

Anatomical entity /structure development stage	Phenotypes
whole plant (PO:0000003)	decreased height (PATO:0000569)
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT6440

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 19710226 [Map]; Strand: c
- AT3G53180.1 - [+] show detail - glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases
  Distance: 0; Region: exon13 (CDS)

AANGGATTGG GTTTCATCAC NNGAAACACG GACNGCNNGC NNCCTNNGTT 
ANCTANTNTN TCNTTCTCTC CCATCAAATA ATTCGTTGTA ACTGCAAATT 
TTTAACATAT GTGTTTTTTC TTCAGGTATG ATTATTGTGA CATTGGTTCT 
GGATCACATG TGCATCTAAG TCTTTGGAAA AACGGCGAAA ATGTCTTCCC 
GGCATCTAAT AACTCATCTT CTCATGGAAT CTCTTCCGTT GGAGAAGAGT 
TCATGGCCGG AGTTCTATTT CATCTTCCAT CAATCTTAGC TATTATAGCT 
CCACTCCCAA ACAGGTAACT CGAAAACCGC ACTTTTCGAG TAATTTCCTC 
AATTGTTATT AAAAGTTGTG TGTGTCACTT AAATTTCCAG CTACGACCGA 
ATCCAACCTA ATACATGGAG TGGAGCATTC CAATGCTGGG GCAAAGAAAA 
CCGCGAAGCG GCGTTAAGAG CAGCTTCTCC ACCAGGAACT CCTGATGGTT 
TAGTTACTAA CTTTGAGATA AAGTCTTTTG ATGGCTCTGC AAATCCTCAC 
CTTGGTTTGG CTGTTATAAT GGCTGCTGGT ATTGATGGTC TCCGGCGACA 
TCTTCAACTT CCTACTCCAA TAGGTAACTA AAAACTTATG TTATTCATTC 
TCATATATAT GTAGTGTTAA TATGAAGCTT GATCTTGAGT TGTTCGGATG 
GAACAGATAT AAATCCGGCG GATGTGGCTG CTACATTGAA CAGACTTCCG 
GAAACGCTCT CAGAAGCTGT TGAANCTCTG GGACAAANAC AAAGTTCTCC 
ACNAATTTGC TCGGACAAAA GCTTTTAGTT GCCATAAAAA GGAATTCCGT 
AAGGTACNCT ATA

5 prime edge [+] show sequence

Chromosome: 3; Position: 19710120 [Map]; Strand: c
- AT3G53180.1 - [+] show detail - glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases
  Distance: 0; Region: exon13 (CDS)

CCNNCTCGNN NANAACTTCN CGTGTGTAGA CCAAGTTGTC GGCAGCATGG 
GATGCAATGG TGTGACCGAG AGATACTTCA AACTGACCTT TCCCGGATTC 
AGCATGAAAC TATGAAAAAA TTTCATACAT GTCAAGAAGC ATGTTGCAGA 
CTGATCATTA TCAGGGATTT TTGAATTATT TGTAACCTGT TCAACTTCGA 
TGTTCAAGGA CTCGAGTGCG GGTACAATAT CATGGAAGAT CGGAGATGCA 
GCATCGAATG AGGATGTGGC ACAGTAAGGA CCAAAGTCAA AAGGCATATA 
CTCTTCTTTC CCTTCCCTTT TAAAAAATGG ACAGAAAAAG TGTTAAGATT 
GTGAAAATGA TTGGATTGAA CAAAGAAACC GGTATTCAAG AAATATATAG 
TCGCATACCG CACAACGTTC TTGAGGAGAT AAAACTCATT CTCAAAACCA 
GCGTTCATTA CCTAAAAGCC AAGGAAGATT TGAGCTTAAG CAACCAAAAA 
GCAAATAAAA GTTTTCGTAG AATGGCTATA TGGAGATTTC TTACCAAGTC 
AAATTCATCT TTGAGAACTT TTGCGACCCT TCTTAAGGTC TCTCGTGGAC 
AGTACTCCCA TGCTTCACCA GGCTTCAATT GCATATCAGC TAAAACCATG 
CTCTCTTGCT TCGTCCTAAT GATAAAATAT GATACGGAAA CAATTAAGAA 
AGAAACATCT GTAAAATTAA CTCCAAAGAA NAATGAACAC NAATTAAAGT 
ACCAAGGTAT TGTCTGCTTG GTTGATANAT CTGGAACAAG TCTAATCTCC 
CCCNCNCCTG TCAATTTANA CTCTTCTGCT GGTCCATCAN TAAATGAANT 
CTCCCCATTG ATG

AT3G53180.1

Model type: Protein coding
Short Description: glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases
Computational Description: glutamate-ammonia ligases;catalytics;glutamate-ammonia ligases; FUNCTIONS IN: glutamate-ammonia ligase activity, catalytic activity; INVOLVED IN: nitrogen compound metabolic process, N-terminal protein myristoylation, nitrogen fixation, metabolic process, glutamine biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine synthetase, catalytic domain (InterPro:IPR008146), Glutamine synthetase, beta-Grasp (InterPro:IPR008147), Glutamine synthetase/guanido kinase, catalytic domain (InterPro:IPR014746), Amidohydrolase 2 (InterPro:IPR006992); Has 14587 Blast hits to 14579 proteins in 2570 species: Archae - 338; Bacteria - 8803; Metazoa - 107; Fungi - 250; Plants - 55; Viruses - 0; Other Eukaryotes - 5034 (source: NCBI BLink).
Link: InterPro Scan - TAIR