GT6469

CSHL Arabidopsis genetrap mutant lines

Original: GT6469

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT6469

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19770728 [Map]; Strand: c
      • AT5G48750.1 - [+] show detail - Cytochrome b561/ferric reductase transmembrane with DOMON related domain
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT6469 - 3-prime edge 
    ATCGACCGTT ACCGACCGTG TTCATCCCTA GTTGTGAGAG TCGCAGCTAA 
    CTTGAACTTC ATTGGTTGTT GCTCTAGTAA AGCATGGAGC CAAAACGAAC 
    AGAAAACACA AACCCACAAA AATAGTTCTC GAAGACAGAA ACATGATGAT 
    GGATTTTCCG AGAGAACACT TAGGTTTAAT CTTTCGAAGT CAGAGTATCT 
    TGCTTTTGAA GAAATTCGAT TAATGAATTT TTTCGTTGTT AGCTAGTGGT 
    CTATATTTAT AAAGAATACA CGATTCCAAT TCCAAGTGTA GTTGTGAATC 
    GTTATTTTTC CTTTTTTTTT CGTGAATCGT TCTTCTCCCT CGGGGANNAN 
    TCTATTTAAA TTTTTTGTCC CCCCAAATTT CAATTTATCT AATTTCTACC 
    ACATTTCAAT TTCGTAAAAG CGATTTATTT TCGTTGTTTA AACTTTTTAA 
    ACCAAAGGAG TTAGCCACAC AATCTAATAA ATAAAACTCA AGCATAAAA

AT5G48750.1

Model type
Protein coding
Short Description
Cytochrome b561/ferric reductase transmembrane with DOMON related domain
Computational Description
Cytochrome b561/ferric reductase transmembrane with DOMON related domain; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF568, DOMON-like (InterPro:IPR007613), DOMON related (InterPro:IPR005018), Cytochrome b561/ferric reductase transmembrane (InterPro:IPR006593); BEST Arabidopsis thaliana protein match is: Cytochrome b561/ferric reductase transmembrane with DOMON related domain (TAIR:AT3G59070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR