GT6495

CSHL Arabidopsis genetrap mutant lines

Original: GT6495

Phenotypes

Morphological phenotypes

Original description

  • small plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT6495

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26013347 [Map]; Strand: w
      • AT1G69190.1 - [+] show detail - Dihydropterin pyrophosphokinase / Dihydropteroate synthase
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT6495 - 3-prime edge 
    GTNTGGGTAT TAATATTATA GCCCATAGNN CNCTTCAANC GTTACCGACC 
    GTTGNCCCCC TACTTATAGG ACCTTCNAGG NAAGAGATTT TTGGGAGATA 
    TTTGTGGTCG TCCTGAGGCA AGTGAAAGAG ATGCTGCAAC TGTTGCTTGT 
    GTTACTGCTG GGATACTAAA AGGTGCTAAT ATCATTAGAG TTCATAATGT 
    TAGAGATAAT GTAGACGCGG CAAGGCTATG CGATGCAATG ATGACGAAAA 
    GGTTCAAAAA TGTTGATTAG TTGATATGAT TTGTTGTATG GTTTTAAGAC 
    TTGAGATGTG TTAAAAATAA GTTTATTTTG TTTTTCCGTA TGAAATTCAG 
    AAGAATTTAG TTCATTTTAT AAAGTTTATT GGCAGTTTTA AAATCCCTTT 
    GTCTATTCGC AGTTGTAAAG TTTCTTCTCN CTCGACNAAG NNANCCTTTG 
    T

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26013382 [Map]; Strand: w
      • AT1G69190.1 - [+] show detail - Dihydropterin pyrophosphokinase / Dihydropteroate synthase
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT6495 - 5-prime edge 
    AGTATTCNTC ATCCCTGCCT TATAAGTTAT AGGTGCATGA GACAATCCTA 
    TACTCTTCTT AGCCATCTCT TCCCTGATTT TTGGTAGCTC CATGACAATA 
    TCTAAATTAT GATCTATTCC CTTAGAAAAT CCAATTCCTG GATCAATCAT 
    AATCCTCCAA GCTGGAATCC CAGAGAGTTC TGCTTCTCTT ACTCTCTCAT 
    AAAGCTCTGT GGCAACATCT TTGCATATTT CATTATACTC CAAATTCTCT 
    TTGTTTTGCA TTGTACATGG ATCTCCTCTC ATGTGCATGA TCATATAAGG 
    AACATCAGAA TCCGCAACAA CCTTATGCAT GTTCTCGTCT AAACTTCCTC 
    CGGATACATC ATTCAAAATG TCAGCTCCAT TTCTTATTGC TTCTAAAGCA 
    ACCTCAGAGT TAAAAGTGTC CACTGATATG AGCTTTCCCT TCNTCTCNCT 
    CGAAAAAA

AT1G69190.1

Model type
Protein coding
Short Description
Dihydropterin pyrophosphokinase / Dihydropteroate synthase
Curator Summary
encodes a bifunctional cytosolic hydroxymethyldihydropterin pyrophosphokinase/ dihydropteroate synthase (HPPK/DHPS)that is involved in tetrahydrofolate biosynthesis and is responsive to oxidative stress.
Computational Description
Dihydropterin pyrophosphokinase / Dihydropteroate synthase; CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005), 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK (InterPro:IPR000550), Dihydropteroate synthase (InterPro:IPR006390), Pterin-binding (InterPro:IPR000489); BEST Arabidopsis thaliana protein match is: Dihydropterin pyrophosphokinase / Dihydropteroate synthase (TAIR:AT4G30000.1); Has 15022 Blast hits to 14981 proteins in 2537 species: Archae - 158; Bacteria - 9759; Metazoa - 8; Fungi - 169; Plants - 69; Viruses - 0; Other Eukaryotes - 4859 (source: NCBI BLink).
Link
InterPro Scan - TAIR