GT6547

CSHL Arabidopsis genetrap mutant lines

Original: GT6547

Phenotypes

Morphological phenotypes

Original description

  • small or tiny plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT6547

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 102814 [Map]; Strand: w
      • AT2G01170.1 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon7 (CDS)
      • AT2G01170.2 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT6547 - 3-prime edge 
    TGNGGTNTTA ATTTATAGCC ATATCCATTT CNACCGTTAC CGACCGTTTT 
    CNTCCCTATC ATTTTGTATG GCCCTCACCG TAAGTCCCCT TCTCTCTTTC 
    TGTGTATCTC TCTTTTGTGT GTTGGGATTG CTGATTGATG AGATGAAACT 
    GGCAGTCACT GGGGAGCATA GTGGCGTTCC AAGCAATGGT GTCGATCGCA 
    ACGATTGGAC TGTACATAGC ATACGCAATC CCGATTATAT TGAGAGTGAC 
    GCTTGCGCGC AACACCTTCG TACCTGGACC ATTCAGCCTG GGAAAATACG 
    GAATGGTAGT CGGGTGGGTG GCAGTCCTGT GGGTTGTAAC CATATCAGTC 
    CTCTTCTCCT TACCCGTGGC ATATCCCATA ACAGCAGANA CACTCAACTA 
    CACTCCGGTG GCAGTTGCTG GTTTGGTGGC CATAACCCTC TCATATTGGC 
    TTTTCAGTGC CCGCCACTGG TTTACGGGTC CCATCTCCAA CATTCTTAGC 
    TGAAACAACG TTTCAGGGGT TGATTTATAG TAAAGCCATT GTTAGCTAGC 
    TGATATTTAC CCTTTTATAC ATTCAACAAG CAACAACACA TCTGTCAC

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 102858 [Map]; Strand: w
      • AT2G01170.1 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon7 (CDS)
      • AT2G01170.2 - [+] show detail - bidirectional amino acid transporter 1
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT6547 - 5-prime edge 
    AGTTCTTCNG NNCGCTTAAT AATATGAGAG CAGAGAGNCA NNCCGCATTA 
    ATGGGGACCT CTCTGCTGTT CACTTTGTGC CATAACGGCG ACATTGGCAT 
    CGCTCCATCT CTCNAAAACN CATACGCCAT CCTTATTAAC CAAACACACA 
    TATGATCAAG TCCTAAATGC AGACAGAATA TGTTTTAACC AAACATGAAT 
    GTATATATAT ACCTGGAATT GCTGGTGACA GAGCTCATGC CACAGAAAAA 
    CACAGCAACC GCAACAACGC CTAAGCACAC GATTCCACCA GTACCGCTCC 
    CAAACCTATT CTTGAAAGCT AAGTAGAAGA TCTCAGCAAT GGCATACCCA 
    CCAGAGTTGT TGGTCTCACT CANAANANAA GGTATGTCTG TGACGGCATA 
    GCTTATGCCC AATATATAAC CCCATCCAAA CAGAATTGAT ATACCAATTG 
    CACTGATTAT TCCTCTGGGC CCGTTCNTCT CNCTCGANGA A

AT2G01170.1

Model type
Protein coding
Short Description
bidirectional amino acid transporter 1
Curator Summary
Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.
Computational Description
bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: amino acid transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 15465 Blast hits to 15422 proteins in 1894 species: Archae - 296; Bacteria - 11987; Metazoa - 438; Fungi - 2169; Plants - 254; Viruses - 0; Other Eukaryotes - 321 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01170.2

Model type
Protein coding
Short Description
bidirectional amino acid transporter 1
Curator Summary
Encodes a bidirectional amino acid transporter that can transport ala, arg, glu and lys but not GABA or pro with both export and import activity. Its expression is localized in the vascular tissues suggesting a function in amino acids export from the phloem into sink tissue.
Computational Description
bidirectional amino acid transporter 1 (BAT1); FUNCTIONS IN: arginine transmembrane transporter activity, L-lysine transmembrane transporter activity, L-alanine transmembrane transporter activity, L-glutamate transmembrane transporter activity; INVOLVED IN: transport, amino acid transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid permease subfamily (InterPro:IPR004756), Amino acid/polyamine transporter I (InterPro:IPR002293), Amino acid permease domain (InterPro:IPR004841); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR