GT6568

CSHL Arabidopsis genetrap mutant lines

Original: GT6568

Phenotypes

Morphological phenotypes

Original description

  • small plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT6568

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19649432 [Map]; Strand: c
      • AT2G48030.1 - [+] show detail - DNAse I-like superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT6568 - 5-prime edge 
    AACCCTAGAC GCAGACGTGC TGGCTCTTAA GACGTTTGGC GGACGAGGCT 
    GACCAAATGA GACCGCTCTC CGATCTCGCT GCGGCGCTGG GGATGAATTA 
    CGTCTTCGCC GAGAGCTGGG CGCCGGAGTA CGGCAACGCC ATTCTCTCTA 
    AGTGGCCCAT CAAAAGCTCC AATGTTCTAA GAATC

AT2G48030.1

Model type
Protein coding
Short Description
DNAse I-like superfamily protein
Computational Description
DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; LOCATED IN: mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT3G21530.1); Has 404 Blast hits to 404 proteins in 167 species: Archae - 0; Bacteria - 325; Metazoa - 1; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 40 (source: NCBI BLink).
Link
InterPro Scan - TAIR