GT6569

CSHL Arabidopsis genetrap mutant lines

Original: GT6569

Phenotypes

Morphological phenotypes

Original description

  • small plants
Anatomical entity
/structure development stage
Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT6569

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5244881 [Map]; Strand: w
      • AT3G15510.1 - [+] show detail - NAC domain containing protein 2
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT6569 - 3-prime edge
    NTCCGNNTCC CTNCCNTTAC CGAGCGTTTT CAGCCCTACC TCCTCCTACA 
    CCGTGAAACC GTTTGCTCGG AGATGCATCT TGCTCCTCCT CTGCTACAGG
    CCAATACGGC ACCGGGAGAG TTCGTTTCAA ATTCGCCATC ATCATAGGAC
    CAGACGACGA AGCATGATTT AAACCAACGA CGTCTGCGTT ATTGTCGTGA
    TCCACTGAGT CAGTACCAAT ATTGTTGATC ATGCCACCGC CGTCGTATAT
    ACTCGTGTTA CCACCGTCAG AGAAAATCCC GTAACCACCA CCGGAGAATT
    TGCCAGGGAA GAAATTCATT GATCTTGAGA CATTATGATG ATGATGGTGA
    AGTCCTGTAG AAGCAGCCGC CATTGATAAA GATGGAGGAA TCTTCCTGAA
    AATGTAATCG ATCATATCAT GATCCTTATC GTTATCAACA TGTCGACTTG
    CGTTGTTCTT CTTGTAGATT CTACATAACA CCAAACTCGA AAAGGGG
  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 5244872 [Map]; Strand: w
      • AT3G15510.1 - [+] show detail - NAC domain containing protein 2
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT6569 - 3-prime edge
    GCNNNNANCC CGNCCGTTAC CGANCGCTAC CTCCTCCTAC ACCGTGAAAC 
    CGTTTGCTCG GAGATGCNTC TTGCTCCTCC TCTGCTACAG GCCAATACGG
    CACCGGGAGA GTTCGTTTCA AATTCGCCAT CATCATAGGA CCAGACGACG
    AAGCATGATT TAAACCAACG ACGTCTGCGT TATTGTCGTG ATCCACTGAG
    TCAGTACCAA TATTGTTGAT CATGCCACCG CCGTCGTATA TACTCGTGTT
    ACCACCGTCA GAGAAAATCC CGTAACCACC ACCGGAGAAT TTGCCAGGGA
    AGAAATTCAT TGATCTTGAG ACATTATGAT GATGATGGTG AAGTCCTGTA
    GAAGCAGCCG CCATTGATAA AGATGGAGGA ATCTTCCTGA AAATGTAATC
    GATCATATCA TGATCCTTAT CGTTATCAAC ATGTCGACTT GCGTTGTTCT
    TCTNGTACAT NCNACATAAC ACCCAATCAT CAAGCTACAC ACAATAAAAA
    AAAATNTTCC CNAANTCAAA ATCAANAATT CAANAAATCA AAAATATTTG
    AAAATTTCGA TNAATCATAC NCTGAGTGAG TTTTTCTTGT TGCCGAAATC
    NCNNCCAGGA GGTCAATTGT TTGGTTTGTT TNCGATNAAA AAATACNCAT
    GCATGATCCA ANCNCTTTTA ACNCCTTTTG GTGGTTTACC ACTGGTAAAA
    AACTATTNCC TTCTCCTCT

AT3G15510.1

Model type
Protein coding
Short Description
NAC domain containing protein 2
Curator Summary
Note of caution: not to be confused with another protein (AtNAC6 locus AT5G39610) which on occasion has also been referred to as AtNAC2.
Computational Description
NAC domain containing protein 2 (NAC2); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (TAIR:AT1G52880.1); Has 3051 Blast hits to 3043 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 3049; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR