GT6624

CSHL Arabidopsis genetrap mutant lines

Original: GT6624

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT6624

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 18381222 [Map]; Strand: c
      • AT4G39550.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT6624 - 3-prime edge 
    TGCGCCAGGG CTCGAGACAG ACTCCCAAGT TTGGGTTCTA GGATCGAAAA 
    CCTCCATCCA ATTGGAGGAA TTGCTGCAGT CTTTGCATCC TCCTGTTACA 
    TATATCTTTC CTTCAACATC ATTATCCGCC GGATATCTCC GCTCTACTCT 
    CATGCCTGGA CCCTCGTGCC ATGTGTGAGA CTGACAGTCC A

AT4G39550.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT5G49000.2); Has 3208 Blast hits to 2568 proteins in 139 species: Archae - 6; Bacteria - 164; Metazoa - 1656; Fungi - 7; Plants - 1275; Viruses - 3; Other Eukaryotes - 97 (source: NCBI BLink).
Link
InterPro Scan - TAIR