GT6633

CSHL Arabidopsis genetrap mutant lines

Original: GT6633

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT6633

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8982427 [Map]; Strand: w
      • AT1G25560.1 - [+] show detail - AP2/B3 transcription factor family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT6633 - 3-prime edge
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGAGACG GCGACGTACG 
    GAAACGACGC TGTTTTGAGA GCGCGTGAGG TTTTGTTCGA GAAGACTGTT
    ACCCGACCGG ATCGTAGCGG TATTCATCTC TCTCGACGAC CGAAACAACT
    CGCGGATAAG CATTTTCCGT TACCGGCGAT GACGACGGCG ATGGGGATGA
    ATCCGTCTCC GACGAAAGGC GTTTTGATTA ACTTGGAAGA TAGAACAGGG
    AAAGTGTGGC GGTTCCGTTA CAGTTACTGG ATCAGCAGTC AAAGTTACGT
    GTTGACCAAT GGCTGGAGCC GGTTCGTTAA AGAGAAGAAT CTTCGAGCCG
    GTGATGTGGT TTGTTTCGAG AAATCAACCG GACCAGACCG GCAATTGTAT
    ATCCACTGGA AAGTCCGGTC TANTCCGGTT CAGACTGTGG TTAGGCTATT
    CGGAGTCAAC ATTTTCAATG TGAG

AT1G25560.1

Model type
Protein coding
Short Description
AP2/B3 transcription factor family protein
Curator Summary
Encodes a member of the RAV transcription factor family that contains AP2 and B3 binding domains. Involved in the regulation of flowering under long days. Loss of function results in early flowering. Overexpression causes late flowering and repression of expression of FT. Novel transcriptional regulator involved in ethylene signaling. Promoter bound by EIN3. EDF1 in turn, binds to promoter elements in ethylene responsive genes.
Computational Description
TEMPRANILLO 1 (TEM1); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: photoperiodism, flowering, ethylene mediated signaling pathway; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Transcriptional factor B3 (InterPro:IPR003340), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to ABI3/VP1 2 (TAIR:AT1G68840.2); Has 6413 Blast hits to 6197 proteins in 270 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 6380; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link
InterPro Scan - TAIR