GT666

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

small plants

Anatomical entity /structure development stage	Phenotypes
whole plant (PO:0000003)	decreased height (PATO:0000569)

Original: GT666

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 1; Position: 20782286 [Map]; Strand: w
- AT1G55610.1 - [+] show detail - BRI1 like
  Distance: 0; Region: exon3 (CDS)
- AT1G55610.2 - [+] show detail - BRI1 like
  Distance: 0; Region: exon2 (CDS)

AAGGAGTCGA CGANNGCATC CCCCCCTATN TGTGCCTCAT CAATGAATTN 
TCCTCTCGTT GTCTTTTGAT ACNNNTNGAA CAATCAANAT GGAGAAGAAG 
AAAAAACNTA AATCNATGCG GNTTNTTTGT NTAANTCCGA GTAGGNTTNC 
CCATGTTCAT CTCNCNCGAC GNTCTTGAAA AGATTCTCAT AGCTNACAAT 
TNCCTCTCAG GAACAATTCC TATGGAGCTT GGTANATGCA NNAGCTTGAA 
CACCATTGAT CTTACCTTCA ATGAGCTTAC TGGTCCNATT CCGANAGAGA 
TATGGATGTT ACCGAATCTC TCGGATTTGG TTNTGTGGGC GAACNATCTC 
ACTGGGACGA TCCCGGAAGG TGTTTGTGTT AAAGGAGGAA ATTTGGAAAC 
TCTTATCCTC AACAACAATC TTTTANCCGG TTCANTCCCT GAGTCGATCT 
CGAGATGCNC CACTATGATC TGGATTTCTC TTTCTACTAG CCGTCTCNCC 
GGTCNAATCC CCGANCGGGA TTGGTNCTCT TTCCAAGTTA GCAATCTTGC 
CCTCAGGGAN TANCTCTCTG TCCGGGAACN TTCCTCAGCC ANGCTTGGGG 
AAGNTGGCAN GNAGTCTGGA TCTGGGCTCG CATCTTGAAA

5 prime edge [+] show sequence
1. Chromosome: 2; Position: 14597135 [Map]; Strand: w
  - AT2G34655.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: 0; Region: exon1 (3UTR)
Flanking Genome Sequence: GT666 - 5-prime edge
```
NTCCANTNTC TCGAGGCGCT AAACAATCAT ATTCTTTGAT TCGCCGCTTC 
CGGGAGTGTA GGTGTGACTT GTCGTCTTTG GCCTAGTTCA TCTCNCTCGA 
CNAAA
```

AT1G55610.1

Model type: Protein coding
Short Description: BRI1 like
Curator Summary: mutant has Altered vascular cell differentiation; LRR Receptor Kinase
Computational Description: BRI1 like (BRL1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: BRI1-like 3 (TAIR:AT3G13380.1); Has 209429 Blast hits to 137168 proteins in 4633 species: Archae - 153; Bacteria - 19509; Metazoa - 66445; Fungi - 10731; Plants - 87448; Viruses - 375; Other Eukaryotes - 24768 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G55610.2

Model type: Protein coding
Short Description: BRI1 like
Curator Summary: mutant has Altered vascular cell differentiation; LRR Receptor Kinase
Computational Description: BRI1 like (BRL1); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: BRI1-like 3 (TAIR:AT3G13380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G34655.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: stem, root, inflorescence, cultured cell, leaf; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR