GT6686

CSHL Arabidopsis genetrap mutant lines

Original: GT6686

Phenotypes

Morphological phenotypes

Original description

  • small plants
Anatomical entity
/structure development stage
Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT6686

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26965212 [Map]; Strand: c
      • AT5G67620.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-ter...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT6686 - 3-prime edge
    TTTACCGACC GTTACCGACC GTTTTCATCC CTACTTACCG CATTATCAGC 
    GCTATCTTGG GTCGGATTCG GATCCGAATT CGGGTTGACT TTGCCCGTTT
    CCTGATCCAG CTTCTTCTTC CTGTGTTTCG TCTTCTTCTT CGTCAAGTCA
    AGCCCTCCTC CTTCTTTCAA TAACTTGCCA AGCTTCACAC ATTTCTTCGT
    CGCAAACTCG TTCAAAACCT CTGCATGATA GTATAAAATT GTCAACAGCT
    TTATAGATCA TTTTATTTAT CAGAAACAGA GAAATGGAGT TAAGAGTGTA
    TATATATATA CCTTCGAAGC TGACGAGACG ATAGACATGT CCGATGAGTA
    AAGTGTCGTC AGGACGAAGG AGTTTAAGCT GCTTCAGTGG CAAACCTTTC
    TCGTTCTTCA T
  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26965121 [Map]; Strand: c
      • AT5G67620.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-ter...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT6686 - 5-prime edge
    TGCATGTTAA TACTCTCATC GTCCAATTTT TTTCTTTTTA ACATATAAAA 
    TGGATCCTTA ATTTTAGTTC TAGTTGTGAC ATGATGAATA AGATATTTAT
    AGATGACTGT CCTGGTCACA TTACTCTGAT CGCTTTATCC TTTTATCATT
    TATGTACGAA TGCTTAATTT AATTCGACCG ATCTTATAGG TCGCCGGAGA
    AAACGGGGGA GATGGGTTTA TGAGGAGGAG CCACGGTGGA GGAAGAGGTG
    GTGGTGGGTG GAGGCCAGCT TTACACAGCA TTCCGGAATT TGGATCCTCA
    TGAGAGCTCT TGATCAAAAG CGTAGATATT TTTAAAGCAA CTATCATCCG
    ACAACATTGA AAGTTTTATG TAAAGCGATG TTACTGTTTT CTGTGGCTTT
    AATGAGATTT CAGTCTTCGA CAAATGTTTT CAAGAACTAT AATCGTTTCT
    AACCTATTAG ATACAAATAT AAGGCACATC CACAATACGA ATTTCTTCGA
    ATTTTCGCAT CCAAATGCAA AACGAAATAG TTGGTTGAAG TATAATTTTC
    AGGTATGCAT AATTTATTTA TCAACCGATG ATTGAATT

AT5G67620.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: microtubule; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62900.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR