GT6981

CSHL Arabidopsis genetrap mutant lines

Original: GT6981

Phenotypes

Morphological phenotypes

Original description

  • tiny plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT6981

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22221967 [Map]; Strand: c
      • AT3G60150.1 - [+] show detail - Protein of unknown function (DUF498/DUF598)
        Distance: -138; Region: promoter
    Flanking Genome Sequence: GT6981 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAGTTT AGTAAGTAGT 
    GTATCTGACT TACCAAAAAA AGAAAGAAGT AAGTAGTGTA TCGGAATGGT 
    TGCAATTAAA TAGTGCAAAC CGATTTGGAT CATTGGTTTC TGGTTAGAAA 
    CCGAAACCAA TAAACCGCTT TGGTTCAAGA GTCTTCCCTT GGGAACAGTT 
    TAGACTTGAG AGCGCGGAGA AGTTGGAGAC GGTGAAGATG GCAGTGAGAC 
    AAAAAGCAAT GGCGACGTTG CCGAAACTGA TTCAAAGCAT GAGAAACGAA 
    GTTACGAAGC AGCCCAGTCT TGTCTTACCA TCTCTCAGAA GAGCTTTCTC 
    TCTCTACGAT CAGATCAATC TCATCGATAA CGTTCCTGAG GATCAGCTCC 
    GATTTCAGGA GTA

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22221870 [Map]; Strand: c
      • AT3G60150.1 - [+] show detail - Protein of unknown function (DUF498/DUF598)
        Distance: -235; Region: promoter
    Flanking Genome Sequence: GT6981 - 5-prime edge 
    ATTCCGTTTA CGTTTCGGTT AAGAGTTTTT TATTTATTTT CTGTTTACCA 
    ATTTAAAACC GAATGTATAC AGTAGATTGG TTTGATACAA AATTTTAAGG 
    AATGTAAAAC CGTTTAATTT GACTAATGCA AAACCATTTC ATAATTTTAA 
    ATCGATTTTT AACTATTCGG TTTGTTTTGG TTTAGATTTT TCATATTAAT 
    GACCTCAAAT CAGAAGGCAA TCTTACGGGA TAAAAAATAT AAATGAATAT 
    ATTCATCTTT CAATAACAAA AACGCAAAAG CCAAACGTTA TGAGTTTTTT 
    TAAATTTTCT TCAATCTAGG TCTACAGTGA AAAGAAGAAA AACAAAACTG 
    GAGTCCACAT CTTAGAACGA GAGACACTTC ACCACGACTC AGGGACCAGT 
    CTGCTTCGAG AAATGGAGCG ACACCGAGTT TGACTCTATT TTCACCAAAG 
    ATAACAAAAA TCTCCTGAAA ACTATATATA AGCTTCGGAT ATTTTCTGGT 
    GTAACTATAG TAG

AT3G60150.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF498/DUF598)
Computational Description
Protein of unknown function (DUF498/DUF598); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF498 (InterPro:IPR007523); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF498/DUF598) (TAIR:AT2G44525.1); Has 753 Blast hits to 753 proteins in 341 species: Archae - 0; Bacteria - 405; Metazoa - 118; Fungi - 87; Plants - 61; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Link
InterPro Scan - TAIR