GT7019

CSHL Arabidopsis genetrap mutant lines

Original: GT7019

Phenotypes

Morphological phenotypes

Original description

  • tiny or dead plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT7019

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 7324119 [Map]; Strand: w
      • AT3G20898.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon2 (CDS)
      • AT3G20900.1 - [+] show detail - unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bac...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT7019 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAGTCG TAACACACAG 
    TTTTTCGAGA CCCTTTGCTT CTTCGGCGCC GGTGGACACG TCAGCATCTC 
    CGGTATCCTA GACTTCTTGG CTTTCGGGGT ACAACAACCG CCTGGTGACG 
    TCAGCACCGC TGCTGGGGAT GGAGAGGGAA CAGAGTAGAT TGTGTCTAGA 
    GGAGAAGACA AATTCGTTGA TGAAGAAGAA CATGTAGAGA CAATAGTAGA 
    TGTAGATGTT TGATCGAGAG TTATACTTGT GTTGATGTTG TTGTGTTGAG 
    GAACTTGTTT CTTGAAACAG CTTCTTGTGA GTTTCTTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 7324218 [Map]; Strand: w
      • AT3G20898.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon2 (3UTR)
      • AT3G20900.1 - [+] show detail - unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bac...
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT7019 - 5-prime edge 
    GTTTTCTTTG CTCCGCCGGA GATAGAGCTC TTCTTCGTCA ACGCACACGA 
    TCGATGAACG TACTTTTAGT TAATTATTAG TATCTTTCTT TTTTTGATAT 
    AGGATCAATA CAGAAAGTAG TATTAGCAGG TGATCAAAAT TCATCTCTTT 
    GATTTGTTAA TACAATAACG AAGAGTAAAT TATTATGTTT TGCGTACTGT 
    TTTTTCTTAT TTTGGTTTGT TTGTTTTTGT TATTATTTTT TTCATTATTT 
    TGGCGCTTGT TTTTTTGAGA TGATTTGAAT CAAGTCGGTT TGAGTTTTTG 
    TGGTAGGGTA TATCAAAAAT CAACTATGAT TTACACTATC AATTGATAAC 
    CCACCCTTTT ATTATTTTAT ATTTTCTTGC TTCACTTTTT TCTAAGTGCT 
    ATGTATTAGG TTGATGACTN TAATTTCTAG CCTACTTAGC TTCGTCAGTT 
    ATTGTAACTT TGATGTGGAT TGAGTTTTTT TT

AT3G20898.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G20900.1

Model type
Protein coding
Computational Description
unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR