GT7082

CSHL Arabidopsis genetrap mutant lines

Original: GT7082

Phenotypes

Morphological phenotypes

Original description

  • dead plants. 6 small plants 4. normal plants.
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT7082

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 14940528 [Map]; Strand: c
      • AT3G42850.1 - [+] show detail - Mevalonate/galactokinase family protein
        Distance: 0; Region: intron26 (CDS)
    Flanking Genome Sequence: GT7082 - 3-prime edge 
    TATTTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGCT GTCATGGCAC 
    TGCCAAGCAA ACACACGATT AACAAACGGT TAACTTACTA GCAGAACTCG 
    ATCATAAGAA CCGCGTTTGA TTTGTAAAAC TATTGATTCA CCTGGTACAT 
    AAGCTCCCCA AGACCAATGA CCTGTTCTTC TGATNGAGCT GCTGTCAACA 
    ATGCTTTGAA AGCCTGAGAA AAATATCACT TTTGTTACAT GTCCACAACT 
    AAAAGTTAAT ATCATTGAAC TGACTAATGA TATATATGCA ACTAGATAAG 
    CTCACCTGCA CACGGAAATT CTCATAAATT GGATGTCTAG TCGGCGCCAT 
    TATGGCGTAT GTACCATCTT TGTCAATGGT TGTGACAGAA TCCCCGTGAT 
    CACCATATTT TTCGAGGAAT TCTTCTCCTG TGATAGACTG TGGGAGCTTA 
    CTTGCATAAA GAGCTTGGAA TCTGCGAAAA AAAGAAGGAA AAAATATCGA 
    TCTCATCTAA TTGATTAACA CAGATGA

AT3G42850.1

Model type
Protein coding
Short Description
Mevalonate/galactokinase family protein
Computational Description
Mevalonate/galactokinase family protein; FUNCTIONS IN: kinase activity, phosphotransferase activity, alcohol group as acceptor, galactokinase activity, ATP binding; INVOLVED IN: metabolic process, phosphorylation; LOCATED IN: cytoplasm; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: GHMP kinase (InterPro:IPR006204), Mevalonate/galactokinase (InterPro:IPR006206), Galactokinase galactose-binding domain (InterPro:IPR019539), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Galactokinase, glycosyltransferase (InterPro:IPR012369), GHMP kinase, C-terminal (InterPro:IPR013750); BEST Arabidopsis thaliana protein match is: arabinose kinase (TAIR:AT4G16130.1); Has 3577 Blast hits to 3572 proteins in 1442 species: Archae - 89; Bacteria - 2609; Metazoa - 174; Fungi - 132; Plants - 130; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink).
Link
InterPro Scan - TAIR