GT7102

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

tiny plants

Anatomical entity /structure development stage	Phenotypes
whole plant (PO:0000003)	decreased height (PATO:0000569)

Original: GT7102

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 2; Position: 7914473 [Map]; Strand: c
- AT2G18180.1 - [+] show detail - Sec14p-like phosphatidylinositol transfer family protein
  Distance: -778; Region: promoter
- AT2G18190.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: 0; Region: exon2 (CDS)

CGTTTTCATC CCTAGTTTTG CTTATCTCGA CCTTTCTATT CTCAACAACA 
GCTAACTACT CCACGAAGGA CAACATCAGT ATCATCTTCT TGCATCAACT 
CTTCATCTAA CTCAGCCGGA GTCACCTCAG TGGAATCGAT CAGCGCCTCG 
ATTTCCTCGC AAAGAGGATG GTTTAAGCCA CCTAAACCGA GGTAATTAGA 
GACCAATGTC CTAAACCCTA AACCTGTACA GTAAGACATG TTGATATGCA 
TATCCATTCT TCCAGGACGT AACAGAGCAG GGTCAAGCCG TTCTTTGTGA 
TTCGTCGTGA ACACAATGAT TCTCTCATCC CCAAAACTTG ACCACAACCC 
ATCAACGAAA TTCAAAAGCC CTGATAGAGT CACCTGCATG GCAAAGACAA 
TACCATAGTC AAAACTAAGA ACCAATAGAT TCTCTCAAAA CTGTACAAAA 
TTTCAAAACA TCTCACCCTT CCATAATAAC CTTCTTCGTA TTCTTGATAC 
TCATCAGCTT CCCTGTCTAC CACCTCGGCA CTACTACAAT CGATATCCTC 
AATAACCAAA ATCGAACGGG TCGTAGTTGA TAACAAGATG CTCTTTAGTT 
GAGCATTTTC ATAAATACTA CTAAGCTCAA GATCAAACAC ATCAAACTTA 
AGATAATTCG CCATTGCAGC AATCAAACTA GATTTACC

5 prime edge [+] show sequence

Chromosome: 2; Position: 7914325 [Map]; Strand: c
- AT2G18180.1 - [+] show detail - Sec14p-like phosphatidylinositol transfer family protein
  Distance: -630; Region: promoter
- AT2G18190.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
  Distance: 0; Region: exon2 (CDS)

GTGACGATAA ACACAATGTT TCTTCTACCA ATGATTTGAA GAAGACGAAG 
AAGAAGAGAA GGTGGAAAAG GAAAAGCGAA AGGAAACTAG GAAAGGCATT 
AAAGTTTATC AGTTAGATTT TGGTTCGGGT TAATCAGTTT GGTTTGATTT 
GTTACTTTAG AAACATAGGG CTATGGTTAA AGTTTATCAC TTTTTTGTTC 
TTTAAATAAA TTTTGAATTT TTGGTTCGGA TACGTTCACA TATAGACGTG 
ACATTTTCTG ATATGGTCGT ATTCTAGCTA TAGCATGGTA TTTCTCTTCC 
CTCCGTTTCT ATGGGGAATG TACAAAGAAC AAAAAAAGTG AGAGAAAGAG 
AAATGGAGAA GAGAATCAAT GGTTGGTCAA A

AT2G18180.1

Model type: Protein coding
Short Description: Sec14p-like phosphatidylinositol transfer family protein
Computational Description: Sec14p-like phosphatidylinositol transfer family protein; CONTAINS InterPro DOMAIN/s: Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251), Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273), Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074); BEST Arabidopsis thaliana protein match is: SEC14-like 12 (TAIR:AT4G36490.1); Has 2664 Blast hits to 2639 proteins in 234 species: Archae - 0; Bacteria - 0; Metazoa - 761; Fungi - 594; Plants - 895; Viruses - 1; Other Eukaryotes - 413 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G18190.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf whorl, sepal, flower, egg cell, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G18193.1); Has 21090 Blast hits to 19452 proteins in 2829 species: Archae - 1310; Bacteria - 7333; Metazoa - 3029; Fungi - 2708; Plants - 2432; Viruses - 36; Other Eukaryotes - 4242 (source: NCBI BLink).
Link: InterPro Scan - TAIR