GT7180

CSHL Arabidopsis genetrap mutant lines

Original: GT7180

Phenotypes

Morphological phenotypes

Original description

  • tiny plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT7180

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 19924752 [Map]; Strand: w
      • AT5G49152.2 - [+] show detail
        Distance: 0; Region: exon2 (NonCoding)
      • AT5G49150.1 - [+] show detail - gamete expressed 2
        Distance: 0; Region: exon2 (5UTR)
    Flanking Genome Sequence: GT7180 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAGATACCA ACCATGATTG 
    GAGTAAAATA GATCTTCCAA TTGCTGATAT CTTCACCAAG ATCCAACGAA 
    ACCCCAGAAA TATACGTACT GTTCCCAAGT TTTCCGTTAA CAGTAACTGT 
    AGGCTTAAAA GCTCTCTGAC CCAACGAAGC GTTTCCATGG TTGTCGAAAT 
    TTCCCAGAAC TTTGATTGAA ATTTCAGAGA TTTCACCAGA TTTGAACTTG 
    TT

AT5G49150.1

Model type
Protein coding
Short Description
gamete expressed 2
Curator Summary
Encodes a transmembrane domain containing protein expressed in sperm cells.
Computational Description
gamete expressed 2 (GEX2); CONTAINS InterPro DOMAIN/s: Filamin/ABP280 repeat (InterPro:IPR001298), Immunoglobulin-like fold (InterPro:IPR013783), Immunoglobulin E-set (InterPro:IPR014756), Filamin/ABP280 repeat-like (InterPro:IPR017868); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G49152.2

Model type
Other RNA
Curator Summary
Potential natural antisense gene, locus overlaps with AT5G49150
Link
InterPro Scan - TAIR