GT7219

CSHL Arabidopsis genetrap mutant lines

Original: GT7219

Phenotypes

Morphological phenotypes

Original description

  • small plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT7219

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3512913 [Map]; Strand: w
      • AT3G11210.1 - [+] show detail - SGNH hydrolase-type esterase superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT7219 - 5-prime edge 
    GGATCTGAAC AATGGAAGAT CCAAACAAAA CGATCTGAGG CCGCGCGGGT 
    CCAACCATTG TCTCCTTCCT AACCTCTCTG TTCCTCTGTT TCAGAGCTGA 
    AGACAGGCCG TTCTTTCTCC CACCGCAAAA GCTAATCGTC CGGTGAAGAT 
    GAACAAACCT GAGCGATCCT CTCTCTCACT CTTTGTCGTA AGGTGCGAGA 
    TTAAATGCAT GAACGTCTCG TTTTTTCTTC TTGTTTTTTG AGTATTATAA 
    CAGACAAATC AAAGAAGAAA AAAACAATAA AAAAAACAAA CCTTTTGTTA 
    TATGTTCCTT ATCATCACGT GCATTACTGT TATTTCCTTT TTTAAGGATT 
    TGTTTCTCAT TCTAGTTTTC TCTTTATGTT TCTCAAAATA TTTTTTACTT 
    GAAATGCTCT CTTCCAAAAA GCAAAATGAT AAGAAATCTT TTCTTTCTTT 
    TTCAATATAT ATGAAAAACT TTAGTTTAAG AATGAATATC TCTTGTATAA 
    GCTTTGG

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3512930 [Map]; Strand: w
      • AT3G11210.1 - [+] show detail - SGNH hydrolase-type esterase superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT7219 - 5-prime edge 
    GATCCAAACA AAACGATCTG AGGCCGCGCG GGTCCAACCA TTGTCTCCTT 
    CCTAACCTCT CTGTTCATCT GTTTCAGAGC TGAAGACAAG CCGTTCTTTC 
    TCCCACCGCA AAAGCTAATC GTCCGGTGAA GATGAACAAA CCTGAGCGAT 
    CCTCTCTCTC ACTCTTTGTC GTAAGGTGCG AGATTAAATG CATGAACGTC 
    TCGTTTTTTC TTCTTGTTTT TTGATTATTA TAACAGACAA ATAAAAGAAG 
    AAAAAAACAA TAAAAAAAAC AAACCTTTTG TTATATGTTC CTTATCATCA 
    CGTGCATTAC TGTTATTTCC TTTTTTAAGG ATTTGTTTCT CATTCTAATT 
    TTCTCTTTAT GTGTCTCAAA ATATTTTTTA CTTGAAATGC TCTCTTCCAA 
    AAAGCAAAAT GA

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3512934 [Map]; Strand: w
      • AT3G11210.1 - [+] show detail - SGNH hydrolase-type esterase superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT7219 - 5-prime edge 
    CAAACAAAAC GATCTGAGGC CGCGCGGGTC CAACCATTGT CTCCTTCCTA 
    ACCTCTCTGT TCCTCTGTTT CAGAGCTGAA GACAGGCCGT TCTTTCTCCC 
    ACCGCAAAAG CTAATCGTCC GGTGAAGATG AACAAACCTG AGCGATCCTC 
    TCTCTCACTC TTTGTCGTAA GGTGCGAGAT TAAATGCATG AACGTCTCGT 
    TTTTTCTTCT TGTTTTTTGA TTATTATAAC AGACAAATAA AAGAAGAAAA 
    AAACAATAAA AAAAACAAAC CTTTTGTTAT ATGTTCCTTA TCATCACGTG 
    CATTACTGTT ATTTCCTTTT TTAAGGATTT GTTTCTCATT CTAGTTTTCT 
    CTTTATGTTT CTCAAAATAT TTTTTACTTG AAATGCTCTC TTCCAAAAAG 
    CAAAATGATG AGAAATCTTT TCTTTCTTTT TCAATATATA TGAAAAACTT 
    TAGTTTAAGA ATGAATATCT CTTGTATAAG CTTTGGAAAG AAACAAAGTC 
    AAGAAGAATA GGGTACTAAA TAAAGAGATT GGGTAGAGAG AGAGATTTAT 
    GAGCAATA

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3512934 [Map]; Strand: w
      • AT3G11210.1 - [+] show detail - SGNH hydrolase-type esterase superfamily protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: GT7219 - 5-prime edge 
    CAAACAAAAC GATCTGAGGC CGCGCGGGTC CAACCATTGT CTCCTTCCTA 
    ACCTCTCTGT TCCTCTGTTT CAGAGCTGAA GACAGGCCGT TCTTTCTCCC 
    ACCGCAAAAG CTAATCGTCC GGTGAAGATG AACAAACCTG AGCGATCCTC 
    TCTCTCACTC TTTGTCGTAA GGTGCGAGAT TAAATGCATG AACGTCTCGT 
    TTTTTCTTCT TGTTTTTTGA TTATTATAAC AGACAAATAA AAGAAGAAAA 
    AAACAATAAA AAAAACAAAC CTTTTGTTAT ATGTTCCTTA TCATCACGTG 
    CATTACTGTT ATTTCCTTTT TTAAGGATTT GTTTCTCATT CTAGTTTTCT 
    CTTTATGTTT CTCAAAATAT TTTTTACTTG AAATGCTCTC TTCCAAAAAG 
    CAAAATGATG AGAAATCTTT TCTTTCTTTT TCAATATATA TGAAAAACTT 
    TAGTTTAAGA ATGAATATCT CTTGTATAAG CTTTGGAAAG AAACAAAGTC 
    AAGAAGAATA GGGTACTAAA TAAAGAGATT GGGTAGAGAG AGAGATTTAT 
    GAGCAATAAT TCAAATGATA TGGTCGTTGG TTGGTAAGTA AAGG

AT3G11210.1

Model type
Protein coding
Short Description
SGNH hydrolase-type esterase superfamily protein
Computational Description
SGNH hydrolase-type esterase superfamily protein; FUNCTIONS IN: hydrolase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity; INVOLVED IN: lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Esterase, SGNH hydrolase-type, subgroup (InterPro:IPR013831), Lipase, GDSL (InterPro:IPR001087), Esterase, SGNH hydrolase-type (InterPro:IPR013830); BEST Arabidopsis thaliana protein match is: SGNH hydrolase-type esterase superfamily protein (TAIR:AT2G38180.1); Has 768 Blast hits to 767 proteins in 294 species: Archae - 0; Bacteria - 304; Metazoa - 76; Fungi - 152; Plants - 166; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink).
Link
InterPro Scan - TAIR