GT7636

CSHL Arabidopsis genetrap mutant lines

Original: GT7636

Phenotypes

Morphological phenotypes

Original description

  • small or tiny plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT7636

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18290173 [Map]; Strand: w
      • AT3G49320.1 - [+] show detail - Metal-dependent protein hydrolase
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT7636 - 3-prime edge 
    TATTTTACCG ACCGTTACCG CCCGTTTTCA TCCCTAGTTA TATAAGGTTT 
    TGGAGAAGCT TGATGCGGCA CTTGATGTTG GAGGTGTGTA TGATCCTCAG 
    AGTGAACGTT ATGACCATCA CCAGAAAGGA TTTAGTGAAG TGTTTGGCCT 
    TGGGTTTAAT ACTAAACTCA GTAGTGCTGG GCTTGTCTAT AAGGTAAAGG 
    ATGATACTTT CTTGTGATTT GGTGCTTAAT TTGAGAATTG GGCTGATATT 
    TTTTGTCTTG TAGCATTATG GATTGGAAAT AATTTCCAAG GAGCTTCGAC 
    TTGAGCAGAG ACATCCTGAT GTGTTTCGAT TGTTTCTAGC TGTGTACAAA 
    AACTTCATTG AGGTAGTGCT TCGTGCTCTA GAAAGGTTGC TTATTAAGAT 
    GCTAGATTCT TTTGGTATCT ATTGAGTGAA CTATCCAAAC TATGCTCACA 
    AAACAGTCTA AAGTTTTTGG CTATGCCTTC GAAAGTTTAG TGTTTGATGG 
    GAACAAGTTG CTGAATCTGT TGTTTTATTG GCAAATATGG CTCTGTCTGA 
    CATTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18290100 [Map]; Strand: w
      • AT3G49320.1 - [+] show detail - Metal-dependent protein hydrolase
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT7636 - 3-prime edge 
    GATGTTGGAG GTGTGTATGA TCCTCAGAGT GAACGTTATG ACCATCACCA 
    GAAAGGATTT AGTGAAGTGT TTGGCCTTGG GTTTAATACT AAACTCAGTA 
    GTGCTGGGCT TGTCTATAAG GTAAAGGATG ATACTTTCTT GTGATTTGGT 
    GCTTAATTTG AGAATTGGGC TGATATTTTT TGTCTTGTAG CATTATGGAT 
    TGGAAATAAT TTCCAAGGAG CTTCGACTTG AGCAGAGACA TCCTGATGTG 
    TTTCGATTGT TTCTAGCTGT GTACAAAAAC TTCATTGAGG TAGTGCTTCG 
    TGCTCTAGAA AGGTTGCTTA TTAAGATGCT AGATTCTTTT GGTATCTATT 
    GAGTGAACTA TCCAAACTAT GCTCACAAAA CAGTCTAAAG TTTTTGGCTA 
    TGCCTTCGAA AGTTTAGTGT TTGATGGGAA CAAGTTGCTG AATCTGTTGT 
    TTTATTGGCA AATATGGCTC TGTCTGACAT TTTTTTTTTC AAATTG

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18290294 [Map]; Strand: w
      • AT3G49320.1 - [+] show detail - Metal-dependent protein hydrolase
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT7636 - 5-prime edge 
    ATGCAAAATC GCACACTCAA AACAAATTAC TGCACAAATT CATAGCTACA 
    CACACAAAAA TTCCAGAATT TTACATAAAA ATCAAACTAA ATGGACCATT 
    TCTCGAGAAT ATCGAAAAAA AATCCAAAAT TGAACCCCAA GAAGGGAACT 
    TTGCCCACAG AGAAACTCAA ATACCGGGCA GATTGAACAA AGGGCACCTG 
    ATGATCTCTG GTTCGGACGA TTTGACCATC CGAGAATCTA TTGGAACGA

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18290267 [Map]; Strand: w
      • AT3G49320.1 - [+] show detail - Metal-dependent protein hydrolase
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT7636 - 5-prime edge 
    CACAAATTAC TAACTAATAC AGAGTTGATG CAAAATCGCA CACTCAAAAC 
    AAATTACTGC ACAAATTCAT ATCTCCACAC ACAAAAATTC AAGAATTTTA 
    CATAAAAATC AAACTAAATT AACCATTTCT CGAGAATTTC GAAAAAAAAT 
    CCAAAATTGA ACCCAAAGAA GGGAACTTTG CACACAGAGA AACTCAAATA 
    CAGGGGGAAT TGAACAAAGG GTACCTGATG ATCTCTGGTT CGNGACCATT 
    TGAGCATCGG AGAATCTATT GGAACGACGA AGGATGAAGC AAGCTAAAGC 
    TTCGTCGCAG TGGAATGTTC CATTATGG

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18290258 [Map]; Strand: w
      • AT3G49320.1 - [+] show detail - Metal-dependent protein hydrolase
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT7636 - 5-prime edge 
    AACCACATCA CAAATTACTA ACTAATACAG AGTTGATGCA AAATCGCACA 
    CTCAAAACAA ATTACTGCAC AAATTCATAG CTACACACAC AAAAATTCAA 
    GAATTTTACA TAAAAATCAA ACTAAATTAA CCATTTCTCG AGAATTTCGA 
    AAAAAAATCC AAAATTGAAC CCAAAGAAGG GAACTTTGCA CACAGAGAAA 
    CTCAAATACA GGGTAAATTG AACAAAGGGT ACCTGATGAT CTCTGGTTCG 
    GACGATTTGA GCATCGGAGA ATCTATTGGA ACGACGAAGG ATGAAGCAAG 
    CTAAAGCTTC GTCGCAGTGG AATGTTCCAT TATGGGTCCC AACACGTTTC 
    GTAGAGAAAC TAGCTCGGAA GTTTGAAGAA CGTTTGAGAA ACAGAGAACG 
    ATTCCAGATT CTGCTGCAAC AGAGACCTCT TGACCCAAAC ATGGCTAAGA 
    GAGAGAAGAA GAAGCTCTTC TACAACTAAA CCCTCGACGT CGCGGGTTTA 
    AGCTTGACAT TATAACGCCG TCGTTTCGTC AACTTTGGGA TTTGATAAAA 
    CGACGCCGTA TGTGTTTTCT TTGTGAAAGA CTAAAATGAC GCCGTTTGAA 
    TTTTACATTT TTGGAATTAT TTTC

AT3G49320.1

Model type
Protein coding
Short Description
Metal-dependent protein hydrolase
Computational Description
Metal-dependent protein hydrolase; CONTAINS InterPro DOMAIN/s: Metal-dependent protein hydrolase (InterPro:IPR003226); BEST Arabidopsis thaliana protein match is: Metal-dependent protein hydrolase (TAIR:AT5G41970.1); Has 666 Blast hits to 662 proteins in 329 species: Archae - 0; Bacteria - 214; Metazoa - 145; Fungi - 141; Plants - 55; Viruses - 0; Other Eukaryotes - 111 (source: NCBI BLink).
Link
InterPro Scan - TAIR