GT7655

CSHL Arabidopsis genetrap mutant lines

Original: GT7655

Phenotypes

Morphological phenotypes

Original description

  • tiny plants
  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT7655

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 9486052 [Map]; Strand: w
      • AT5G26960.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT7655 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTAGTCC AGATCCACCA 
    ACCGTCGTCC ACGGCGGCGA ATTCTTCAGC TACAATCGCT TCTCTACCTG 
    ACGATTTACT CCTCGAATGT ATCTCAAGAG TCCCTTCCTC TTCAATTCCT 
    TCTCTCGCCG TCGTTTGTCG CCGTTGGTCT CGTCTCCTCC ACTCTCCTTA 
    CTTTCTTCAT

AT5G26960.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G67480.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR