GT7780

CSHL Arabidopsis genetrap mutant lines

Original: GT7780

Phenotypes

Morphological phenotypes

Original description

  • tiny plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT7780

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 2856626 [Map]; Strand: c
      • AT3G09290.1 - [+] show detail - telomerase activator1
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT7780 - 3-prime edge 
    TTTTCATCCC TAATCATCGT GTTATTGAAG TATTGGATCT CGAGCTCCGG 
    TTAGGCCAAA GCGTCGTAAA GAAGAATACA ACATAGTCTC TGAACGATGA 
    ATCATATATT GATTGCATTG TATCAATGGG AAAATCCCTA TGAAACACCA 
    AACTCTCTAA TCCGTCTATT ACAAATGGAT TCGTGGCTCA AATTGTATTG 
    TGAGGTGTGC ATTTGTATCT TATTGCTACC ATTATCGTTG TTGTACCTTG 
    TATTGATCTT TGTTTCCTTG CTTGGGTTAA TTTCACCAAC AACTTTTGTA 
    AATGACATAC ACGTCCAAAC AAACAAACAT ATATATAGAA ATTATATATA 
    TTTGGTGTTT GCTTTATAGT TGTTTAGGGA AAATGAATAA CTAATAAGCT 
    TAACTTAGCT CAACATTATT GATCTGGTCA TGGTAGAGAC TATTCAAACT 
    TGTTCACTG

AT3G09290.1

Model type
Protein coding
Short Description
telomerase activator1
Curator Summary
encodes activation factor TAC1 which mediates telomerase activity
Computational Description
telomerase activator1 (TAC1); FUNCTIONS IN: transcription activator activity, zinc ion binding, sequence-specific DNA binding transcription factor activity, nucleic acid binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like (InterPro:IPR015880), Zinc finger, C2H2-type (InterPro:IPR007087); BEST Arabidopsis thaliana protein match is: C2H2 and C2HC zinc fingers superfamily protein (TAIR:AT3G53820.1); Has 684 Blast hits to 684 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 636; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR