GT7847

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

indehiscent silique (AGL8 == fruitfull)

Anatomical entity /structure development stage	Phenotypes
fruit (PO:0009001)	abnormal (PATO:0000460)

Original: GT7847

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Not mapped
Flanking Genome Sequence: GT7847 - 3-prime edge
```
GGGGGGGGGG GGGGGGGGGG GGGGGGGGGG GGG
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 24505932 [Map]; Strand: w
- AT5G60910.1 - [+] show detail - AGAMOUS-like 8
  Distance: 0; Region: exon1 (CDS)
- AT5G60910.2 - [+] show detail - AGAMOUS-like 8
  Distance: -616; Region: promoter

TATAGAGAAC AAGATCAATA GGCAAGTTAC TTTTCTCAAA GAGAAGGTCT 
GGTTTGCTCA AGAAAGCTCA TGAGATCTCT GTTCTCTGCG ATGCTTGAGG 
TTGCTCTCAT TCGTCTTCTC TTCCAAAGGC AAACTTCTTC GAATATTTCC 
ACCGACTCTT GGTAAATGTT TTTTAATGTT TTATATTATA TATCACATCG 
ATCATATCTA TCTGTTTTCT TGATCTTTAA CCAGATTTTG TTTTTTATTC 
GTACTTCTCG ATCTCGATCG TCGTCAGCCT TGGAAATAAA TCCAAATCTC 
GTATCTTG

3 prime edge [+] show sequence

Chromosome: 5; Position: 24505621 [Map]; Strand: c
- AT5G60910.1 - [+] show detail - AGAMOUS-like 8
  Distance: 0; Region: intron1 (CDS)
- AT5G60910.2 - [+] show detail - AGAMOUS-like 8
  Distance: -305; Region: promoter

GANTGNATAC GACTCCTATA GGGCGAATTG GGCCCTCTAG NTGCATGCTC 
GAGCGGCCGC CAGTGTGATG GATATCTGCA GAATTCGCCC TTGGTCGAGA 
GAGATGAAAG ACCAAGATAC GAGATTTGGA TTTATTTCCA AGGCTGACGA 
CGATCGAGAT CGAGAAGTAC GAATAAAAAA CAAAATCTGG TTAAAGATCA 
AGAAAACAGA TAGATATGAT CGATGTGATA TATAATATAA AACATTAAAA 
AACATTTACC AAGAGTCGGT GGAATATTCG AAGAGTTTGC CTTTGGAAGA 
GAAGACGATG AGAGCAACCT CAGCATCGCA GAGAACAGAG ATCTCATGAG 
CTTTCTTGAG CAAACCAGAC CTTCTCTTTG AGAAAGTAAC TTGCCTATTG 
ATCTTGTTCT CTATAGGGAT GAAAACGGTC GGTAACGGTC GGTAAAATAC 
CTCTACCGTT TTCATTTTCA TATTTAACTT GCGGGACGGA AGGGCGAATT 
CCAGCACACT GGCGGCCGTT ACTAGTGGAT CCGAGCTCGG TACCAAGCTT

5 prime edge [+] show sequence

Chromosome: 5; Position: 24506199 [Map]; Strand: w
- AT5G60910.1 - [+] show detail - AGAMOUS-like 8
  Distance: -56; Region: promoter
- AT5G60910.2 - [+] show detail - AGAMOUS-like 8
  Distance: -883; Region: promoter

ATGAATGTGA TAATAGCTAT TTTATTTTTT TTATTTTTTC TTTTATGGAC 
TTTTGTTGGG TTGCGCGTGA GTCTACAGTG ACGTAAGTGA TGTGGTATAA 
ATACGGTATG TGACGTGAAT ACATAGACGA TGATATTTGT GGAAAAAAAA 
GAAAGAAAAA AAAACCCCAA AGGCTCCTTC CGAGGGGAAA AAAAAACCAA 
AGGGGAAAAA AAGTTTAAAG GGCGGTTGGG AAAAAAAACC ATTGGAGGGG 
GGGGGGAGCC CTAATGGGCT ACTTTTAACG GGGCTGGAAA CTCGTCCGTA 
AGTTTGGGGC CCC

AT5G60910.1

Model type: Protein coding
Short Description: AGAMOUS-like 8
Curator Summary: MADS box gene negatively regulated by APETALA1
Computational Description: AGAMOUS-like 8 (AGL8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G60910.2

Model type: Protein coding
Short Description: AGAMOUS-like 8
Curator Summary: MADS box gene negatively regulated by APETALA1
Computational Description: AGAMOUS-like 8 (AGL8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 3783 Blast hits to 3782 proteins in 618 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 10; Plants - 3766; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR