GT7868

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

small round leaves

Anatomical entity /structure development stage	Phenotypes
vascular leaf (PO:0009025)	decreased size (PATO:0000587) increased width (PATO:0000600)

Original: GT7868

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 2; Position: 16103991 [Map]; Strand: w
- AT2G38460.1 - [+] show detail - iron regulated 1
  Distance: 0; Region: exon3 (CDS)

TAGACCCATT GCCCCCAATG GGACCAAAGA TTGCAGTAGA ACCAGATTCT 
ATAGCACCAT AAATGGCAGC GAGAAGCAGA GAGTTTGGCC ACAAGTGGAT 
CATATACAAT GCAACAGAGA ATTCCCATGT TCTGCATCAC AAAACCAAGA 
AAAGAAAGTA GTCCATCATC TTCAAAACGT CTAACACTAA TACACTATGA 
ATAAAGTTTT ATATCTTCAT ACAATAAAAA AAAAAAAAAA GTTTTAAAAT 
ATTTGGAAAA AAAGGGTTGG GGGAAACTTC CCGGGGCTCC CTTTTTGGAA 
AAAAATTTCC CCCGCAAAAA TTTTTCCCCA AACCCCCCCC AAGGGGGGGG 
GGGGGGTTTT GGGGGGG

5 prime edge [+] show sequence

Chromosome: 2; Position: 212101 [Map]; Strand: c
- AT2G01470.1 - [+] show detail - SEC12P-like 2 protein
  Distance: 0; Region: exon10 (3UTR)

CTTGTAACCA ACATATCATA CGATTATCGC TTTGAGTTAG CTTTTTATGT 
TTGACATCTA CCAGAAACTT GCTTGCTTTA TATCAATAAA ACATGTAAAC 
TAACACTAAA ACAGCAAAAG TTACAATTTG TTTCCTCTTT TTTTTTTGGG 
GACCTTGGAA ACCTAAAAAC TTTTTTTTTT TGGGGGGTCC GGAAAAATTT 
TTTAAACCTT TCTTAATTTT TAAAAACCGA AAAAAAACCT TGGGGTTCAA 
CTTTTCTTGG GAGTTTTTTC CTTTTAAAAA AAGGGAAAGT AACAGGGCGG 
GGAAACTATA TTTGGAAATT CCCCCCGGGT A

AT2G01470.1

Model type: Protein coding
Short Description: SEC12P-like 2 protein
Curator Summary: Sec12p-like protein (GTP exchange protein) that functionally complements yeast sec12 null mutant. Protein is localized to the ER.
Computational Description: SEC12P-like 2 protein (STL2P); FUNCTIONS IN: nucleotide binding; INVOLVED IN: ER to Golgi vesicle-mediated transport; LOCATED IN: integral to endoplasmic reticulum membrane, endoplasmic reticulum, plasma membrane, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT5G50550.1); Has 6374 Blast hits to 3814 proteins in 364 species: Archae - 22; Bacteria - 2789; Metazoa - 1016; Fungi - 1422; Plants - 400; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G38460.1

Model type: Protein coding
Short Description: iron regulated 1
Curator Summary: Encodes IRON REGULATED1 (IREG1/FPN1), one of the Arabidopsis orthologs (AT2G38460/IREG1/FPN1 and AT5G03570/IREG2/FPN2) the iron efflux transporter ferroportin (FPN) identified in animals.
Computational Description: iron regulated 1 (IREG1); CONTAINS InterPro DOMAIN/s: Ferroporti-1 (InterPro:IPR009716), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: iron regulated 2 (TAIR:AT5G03570.2); Has 345 Blast hits to 287 proteins in 82 species: Archae - 0; Bacteria - 2; Metazoa - 164; Fungi - 61; Plants - 95; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).
Link: InterPro Scan - TAIR