GT7884

CSHL Arabidopsis genetrap mutant lines

Original: GT7884

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT7884

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24504897 [Map]; Strand: w
      • AT5G60910.1 - [+] show detail - AGAMOUS-like 8
        Distance: 0; Region: exon2 (CDS)
      • AT5G60910.2 - [+] show detail - AGAMOUS-like 8
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: GT7884 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCCTCC CTACCTACAG AGGGATTTCA 
    ATGTTCTTAC ACCCAACTAG TTGACCCTAG GCTTTGCACA AAGAGTGAAG 
    CTTAGATCGT TTGTTTAACC TACCGAATGT ACACTCTTGG TGGAATTCAC 
    TAATGTAGAT AAGACACCAA TGGTGCAGGA AAATTGGGTT CTTAAACATG 
    CTAAGCTCAA GGAAGGAGTT GAGGTACTTG CGTAAGAACG AAAAAGACCT 
    TATATGTCAT AATACACAAA TTTACAAATG ATCTCACATT TTTATGACAG 
    AGAGATATGT GCGCATGGGN CAAAAATAAA GATCGTGCTA ATCAAATAGC 
    CAAGTAAAAC ATATATTTAC AAGAGTATTT GTCCCAAGTT AACTAAACTT 
    TTGGGTCGCA CATACAAACT TCTAATGTAT TCAACTTTTT TCCTTTACTT 
    AAGAGGGAAT GAATGTGTAT TGATCGTGAC TTCGTTATTG CTCATATAAG 
    TTTATGACAC TAT

AT5G60910.1

Model type
Protein coding
Short Description
AGAMOUS-like 8
Curator Summary
MADS box gene negatively regulated by APETALA1
Computational Description
AGAMOUS-like 8 (AGL8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60910.2

Model type
Protein coding
Short Description
AGAMOUS-like 8
Curator Summary
MADS box gene negatively regulated by APETALA1
Computational Description
AGAMOUS-like 8 (AGL8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 3783 Blast hits to 3782 proteins in 618 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 10; Plants - 3766; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR