GT7928

CSHL Arabidopsis genetrap mutant lines

Original: GT7928

Phenotypes

Morphological phenotypes

Original description

  • small plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT7928

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 4333615 [Map]; Strand: c
      • AT5G13485.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: GT7928 - 5-prime edge 
    CTAGCGTTTG GGAAGCTACA CATGAAGGTC AACGGCATTT TCCCAATGCG 
    AGATCTCACC AAGCTGAGCA GTTGCAGATT TGCTTGTCCT CGGTTGCCCC 
    GCCTTCTCCT TTAAGAGGTG CTGATTGGTA CCAATGGAAG CAGCCCACAG 
    GTACTTTTTC TGAAACATTC TCTTCGAAAG GAACTTGGAT GCAAATTAGA 
    CAAATTTCTC CTCATGTGGC TTGGCATAAA GCTGTCTGGT TTAAGGAATC 
    TGTCCCAAGG TTTTCATTTA TCCATTGGAT GGCTTCCCAT GAAAGGTTGA 
    CAACGAGAGA TAGGCTTTTA CAGTGGGGTA TGAATGTACA TGGTTCTTGT 
    GTTCTGTGTG ATTCTGGCCT TGATTCCCAT GATCACTTGT TCTTCAAATG 
    TGAGTTTTCT AGATCACTTT GGATTTCGCT CGCTGGAAGG AGTTCGCCGA 
    ATCCTCCACT CTCTTTACCC TTGGCTTCTA TGTGGGTTCT TGGTGTACAT 
    T

AT5G13485.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 6.7e-12 P-value blast match to GB:AAA39398 ORF2 (Mus musculus) (LINE-element)
Link
InterPro Scan - TAIR