GT7966

CSHL Arabidopsis genetrap mutant lines

Original: GT7966

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT7966

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 19457696 [Map]; Strand: c
      • AT1G52240.1 - [+] show detail - RHO guanyl-nucleotide exchange factor 11
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT7966 - 3-prime edge 
    TACATCCGCC TATAGGCAAA GAAGGTCGGT CAACGCTGCC ACATTTTCCG 
    GGTTGACTCC TAAACATCAT CATGTCATTA TCATCATCAT CCAAATTGTC 
    AGAACCATCC ATTCTCATTG CACAATCTGA GCTCCAGCTT TTAACATGTC 
    TTGAAGCTGA GTTTTCGTTC ATC

AT1G52240.1

Model type
Protein coding
Short Description
RHO guanyl-nucleotide exchange factor 11
Curator Summary
Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily .
Computational Description
RHO guanyl-nucleotide exchange factor 11 (ROPGEF11); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512), Dynein light chain, type 1/2 (InterPro:IPR001372); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 13 (TAIR:AT3G16130.1); Has 1099 Blast hits to 1098 proteins in 168 species: Archae - 0; Bacteria - 0; Metazoa - 490; Fungi - 40; Plants - 487; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink).
Link
InterPro Scan - TAIR