GT8016

CSHL Arabidopsis genetrap mutant lines

Original: GT8016

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
  • tiny plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT8016

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 29418154 [Map]; Strand: c
      • AT1G78180.1 - [+] show detail - Mitochondrial substrate carrier family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT8016 - 3-prime edge 
    CCGGAAAAGA CTGATAGACA TGAAGCAGCA GGGACAAGAA CTCAATGCTC 
    TATACAGGCT CGAGTTAGGA CCCATCATAA CTTATGTACG GTGCTATAGC 
    AAGTGCTTGT ACTGAAGTAT CCACTTATCC TTTCAAATAC TGAGACGACA 
    GCTTCAGATG CAGATGGGTA AAAACAAGCT CAATGCTTTA GCTATGGGAT 
    TCAATATCAT TGAAAGAGGA GGGATCCCAG CTTTATACGC TGGACTTTTA 
    CCTAGCTTGC TACAAGTTTG CATAATACTT GTTTCATTAC TAAACTCAAC 
    TAGTGTATCT ACTGTTAACA AAAGCTTGAT ATGTTCGTGT TTCACATCTC 
    CAGGTATTGA CTTAGGCTTC AATAAGCTAC TTTGTCTACC AGTGTATGAA 
    GATAGTACTT AAAGTAGAAT AACAAGATTA TGATATTGGA AGAGTACTAG 
    AGCTTAAAGA ATCATTCATT ACACAATGCA TCTGCGTGAT GAATCAATCT 
    AAAACACAAT GCTT

AT1G78180.1

Model type
Protein coding
Short Description
Mitochondrial substrate carrier family protein
Computational Description
Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G64970.1); Has 23010 Blast hits to 13205 proteins in 452 species: Archae - 0; Bacteria - 0; Metazoa - 9903; Fungi - 6601; Plants - 4239; Viruses - 0; Other Eukaryotes - 2267 (source: NCBI BLink).
Link
InterPro Scan - TAIR