GT8060

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

semi-sterile

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: GT8060

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 2; Position: 172439 [Map]; Strand: w
- AT2G01390.1 - [+] show detail - Tetratricopeptide repeat (TPR)-like superfamily protein
  Distance: 0; Region: exon1 (CDS)

TAGTCTTGAG CAGAGTCCCA AGTGGAGTAC TTGAGGATGT TATAGATGTT 
GGATACAATG TCTCTTGTGT AAACACTGGG ATCTGGTAGG GTCTGTGTTT 
TCACAAGTTT GGGTTTTTGG GAGAATCGCT TGGAGTTGGT GGGTTTTAGA 
CGAGGAAGAG AGTGAAGTAG CTTGACGGAG CTCCGGCGAT TGGAGAATTG 
GATTGGGGTA TTGCGGAAGA TGCTAGAGAA GCGCATGAAG CTTTGCCCAG 
AGAGATAACC AATTCTAAAC TCCAACCTTG CAGTGTATTA GAAAGCTTTG 
TTTGAATAAG ACGCCGTTTT TTATTCAAGT AAAATTTCAA AAATCTAGAT 
TCAAAGAAAA AAATTCAAAA ATCTATGCAA GTCTTTAACC ACAATTATAA 
AGTTAGGGTT TATAATTTGA CTTAGGACCT GGGCGTTCGG GTATTCGCTT 
CGGTTTTAGT TGGATTCCGA TTCCTTCGGT TTTTGAGTGT AGAATCCATA 
TATGAACCGA AACAGTTTCA GTTTGGTACG GGTTTGGTTC T

5 prime edge [+] show sequence

Chromosome: 2; Position: 338320 [Map]; Strand: w
- AT2G01780.1 - [+] show detail - Curculin-like (mannose-binding) lectin family protein
  Distance: 0; Region: exon4 (CDS)

TTCATACATT TTGGTGGTAT ACAGAAAGAG GTCAATGATA GAACCAGTCC 
TATACAGTCG GCCCCCATAG TTAGAAACGA AAAGCTGAGG GAAGCTAGAG 
GCAACATATT CCTCTCCTCA TCTTTTAGGT TCGAGGTTTA GCGTGTAACT 
CGATTTGGAC GGATTATCAG GGGTTTCCCA CGCCACCAAA TATTGATTGA 
CGCCCCAATG AAAATTCCAA CCCAATGCCA TTTTTGGAAG TAAGTATCCG 
TCGGGAAATG GAAGCTTTGC CATAAGAAAC CTCGCTGTGT CGTTATCCCC 
TGTGTTCTTG ATAGCGAAGT TTCCGTCAGC AAGCAGTTTT TTTTTTAA

AT2G01390.1

Model type: Protein coding
Short Description: Tetratricopeptide repeat (TPR)-like superfamily protein
Computational Description: Tetratricopeptide repeat (TPR)-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: pentatricopeptide (PPR) repeat-containing protein (TAIR:AT2G01360.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G01780.1

Model type: Protein coding
Short Description: Curculin-like (mannose-binding) lectin family protein
Computational Description: Curculin-like (mannose-binding) lectin family protein; FUNCTIONS IN: sugar binding; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480); BEST Arabidopsis thaliana protein match is: receptor kinase 3 (TAIR:AT4G21380.1); Has 1787 Blast hits to 1759 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1787; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR