GT8316

CSHL Arabidopsis genetrap mutant lines

Original: GT8316

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT8316

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 14984626 [Map]; Strand: c
      • AT4G30760.2 - [+] show detail - Putative endonuclease or glycosyl hydrolase
        Distance: 1207; Region: intergenic
      • AT4G30770.1 - [+] show detail - Putative membrane lipoprotein
        Distance: 1015; Region: intergenic
    Flanking Genome Sequence: GT8316 - 3-prime edge 
    TATGCATAGG ACTAGGAGTG AAATAGAGCA ATAACTTCAC TATCTTTCTA 
    CATTTGCGTT AACCAAAGAA ACTTCCCAAT TCTCATGGCT CATGGGATTA 
    CATTCCATTC TCAAAGCCAC TTAACTCCAA GTGTCAGCCC TAATATAAAA 
    AAAACTTCGA TCATAGTGGT ATACGAGGAC TAGACTAATT GGTGACCGTG 
    TGGAGTAGTG CTTCATCT

AT4G30760.2

Model type
Protein coding
Short Description
Putative endonuclease or glycosyl hydrolase
Computational Description
Putative endonuclease or glycosyl hydrolase; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G62050.1); Has 175 Blast hits to 167 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 173; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G30770.1

Model type
Protein coding
Short Description
Putative membrane lipoprotein
Computational Description
Putative membrane lipoprotein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein match is: Putative membrane lipoprotein (TAIR:AT5G17590.1); Has 36 Blast hits to 36 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR