GT8608

CSHL Arabidopsis genetrap mutant lines

Original: GT8608

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage
Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT8608

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24277563 [Map]; Strand: w
      • AT5G60350.1 - [+] show detail - unknown protein; Has 110 Blast hits to 97 proteins in 36 species: Archae - 0;...
        Distance: -167; Region: promoter
    Flanking Genome Sequence: GT8608 - 3-prime edge
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTTATGG CAGTTTGTTT 
    AAAAAACAGT TCTGTATAGA TCTCGGAATC TCTTTCGTAA TATACCTTCC
    TTCCTTCTAA TTTCCAGGAA ACATCAACTT TATTACTTAT TATCAGAACA
    AAAATATATG TTCTGGAAAC GATATTATAT TCTATTAATA TTGGAACAAC
    TTTCCGATCA TTAGTATATG AAGAAAATTT AATCTTCTTT TTTCTTCTCT
    CTCGA
  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24277661 [Map]; Strand: w
      • AT5G60350.1 - [+] show detail - unknown protein; Has 110 Blast hits to 97 proteins in 36 species: Archae - 0;...
        Distance: -69; Region: promoter
    Flanking Genome Sequence: GT8608 - 5-prime edge
    ATGGTGGCCA CATAAAGAAG ACCATAGAAA TGATACAAAG GAGTGATGAA 
    GTCGTTGCCG TTTACGCGGT TTTATGGCAT AAGTCATTAT GATCTCCCTC
    TATCTCAACT GGATGCATAA ACACACATAC TAATGAACCT CTATAAATAT
    AACATACATA GAATGAAGCT GAAGCATAAA CAGCCCAACC AAGTCATATC
    TTATCTCTGT TCTTTGACTT TCCCTTTTTA CAGATTCTTT GCCAATAGAA
    CCTAAGAAAA AGACATAAT

AT5G60350.1

Model type
Protein coding
Computational Description
unknown protein; Has 110 Blast hits to 97 proteins in 36 species: Archae - 0; Bacteria - 10; Metazoa - 39; Fungi - 2; Plants - 5; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).
Link
InterPro Scan - TAIR