GT8774

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

tiny plants

Anatomical entity /structure development stage	Phenotypes
whole plant (PO:0000003)	decreased height (PATO:0000569)

Original: GT8774

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 20111116 [Map]; Strand: w
- AT3G54300.1 - [+] show detail - vesicle-associated membrane protein 727
  Distance: -433; Region: promoter
- AT3G54300.2 - [+] show detail - vesicle-associated membrane protein 727
  Distance: -464; Region: promoter

TTTGAAAGAA GTTTAGTGTT AGTCACTTTG TTTCTGGTGT GTTTCCCGTT 
TGTGTCACTT ACTCCAAACT TTGCTGCTTT TTTCATATTT TGGCTCATCT 
AATTTTGTTG CAATATTCAC ATTATCTTTT ATCTTTTGGA TTGGAAAAAG 
TATTTGATTA TCGTTTAGAT AATCAACTTT GTTTGCGTGT ACGTTTTCAT 
CAGTTTTCAG GTGTGATCTG TAAATTTAAC AAATTCAGAA TTTATGACTG 
ATGATTAATT TACCCATCAC AAAGGAACCA TACCGAACAC AGTTACGGTC 
ATTTCAATTG TAACCCGAAA AAATAATAAA GAACCGGTAA TATCCAAATC 
AAAGTATCAA ACCAAGGCGA AATAGAATGG GTTTCCGATT TCAATAGCTA 
A

AT3G54300.1

Model type: Protein coding
Short Description: vesicle-associated membrane protein 727
Curator Summary: Encodes a member of Synaptobrevin -like protein family. VAMP727 is a R-SNARE and interacts with SYP22/VTI11/SYP51. It is required for trafficking of storage proteins to the protein storage vacuoles (PSV) and also for PSV organization and biogenesis. Loss of function mutations have no phenotype but double mutants with SYP22 are embryo lethal.
Computational Description: vesicle-associated membrane protein 727 (VAMP727); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vacuole organization, protein targeting to vacuole; LOCATED IN: endosome, SNARE complex, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 726 (TAIR:AT1G04760.1); Has 2397 Blast hits to 2395 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 970; Fungi - 430; Plants - 618; Viruses - 0; Other Eukaryotes - 379 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G54300.2

Model type: Protein coding
Short Description: vesicle-associated membrane protein 727
Curator Summary: Encodes a member of Synaptobrevin -like protein family. VAMP727 is a R-SNARE and interacts with SYP22/VTI11/SYP51. It is required for trafficking of storage proteins to the protein storage vacuoles (PSV) and also for PSV organization and biogenesis. Loss of function mutations have no phenotype but double mutants with SYP22 are embryo lethal.
Computational Description: vesicle-associated membrane protein 727 (VAMP727); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: vacuole organization, protein targeting to vacuole; LOCATED IN: endosome, SNARE complex, membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Longin (InterPro:IPR010908), Longin-like (InterPro:IPR011012), Synaptobrevin (InterPro:IPR001388); BEST Arabidopsis thaliana protein match is: vesicle-associated membrane protein 726 (TAIR:AT1G04760.1); Has 2397 Blast hits to 2395 proteins in 262 species: Archae - 0; Bacteria - 0; Metazoa - 970; Fungi - 430; Plants - 618; Viruses - 0; Other Eukaryotes - 379 (source: NCBI BLink).
Link: InterPro Scan - TAIR