GT88

CSHL Arabidopsis genetrap mutant lines

Original: GT88

Phenotypes

Morphological phenotypes

Original description

  • small plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT88

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 2183643 [Map]; Strand: c
      • AT2G05760.1 - [+] show detail - Xanthine/uracil permease family protein
        Distance: 0; Region: exon13 (CDS)
    Flanking Genome Sequence: GT88 - 3-prime edge 
    ACGTTACCGA CCGTTTTCAT CCCTAGGTGG GTCAAGTTTA GAACTTTCAG 
    AGGTGATAAT CGTAATGAAG AGTTCTACAC TTTGCCTTTT AACCTCAACA 
    GATTCTTCCC TCCTACATAG TTAGTAAACT TAATCAATAA TAAAACTTTG 
    ATTGGTTTAT GATTATTCTT TTTTGATTAA GTGGTCTCTA ATTTATAACC 
    AACGTTGGAA GTAGATTACT TCAACATTCA ATTTTATCAT TTTTTTTTGG 
    TCG

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 2183548 [Map]; Strand: c
      • AT2G05760.1 - [+] show detail - Xanthine/uracil permease family protein
        Distance: 0; Region: exon13 (CDS)
    Flanking Genome Sequence: GT88 - 5-prime edge 
    CNTTCGAGGC TGCCTCTATC TTTCTTTGAT CTCTCTACTT CCATTGTGTT 
    GTCCATGAAT ACTGCAATGA TTAGACCAAC TGTTGCTGGT GACATGAATA 
    ATGTGTTCAA GAATGCGTTG AACCATCCTG CGTTTGTGTG AACTAATCCG 
    TAATGTCTAG CGTCCCAGTA CTGAGCGAAG AATTGAGGTA TGGAGATTCC 
    GAGAAAGAGC GAAAGTCCGG TGATCATTAG GTTTCTCATT GAGTTCATGT 
    TTGTGAACTG AAGAAATGAG AGACCAACCG CAGCTGCAAG AAGAGCCAAC 
    CATACATGTA TTGAATTCTT ATGTCTTGAT GATGATATTG TCTTTGATGT 
    AGTAAGTGAT GATGGTCTTA CCAACAAGGC CGAAGAGGAT GCAGTGCAAC 
    GCTGCGTATA TCGGGACTGG TATCGATGCG AAAACAGCTC CGAATTTGCC 
    TGATCAAAAC AAAACGACCA AAACCAAACG TTAAGGATCA CAAGAGATAG 
    TACAATAGTA TGGTTCAAGA CTAGGAGTAT GAGTTATGTT ATAATATACC 
    CAATGTTGAG AAAACAATCA TGAAGCCTGC AGATACTTGA ACAACACGAC 
    GACTACCAAC TCTTGTTAAC CCTAGAATCC TACATTTTCN CTGCAGACAC 
    ATTCAACTCC TTCATTAGAG TGTCCAAACA TANAACAGTT NCTTACAAGA 
    AGAAGTTATT TAACTTACAC TAGAAC

AT2G05760.1

Model type
Protein coding
Short Description
Xanthine/uracil permease family protein
Computational Description
Xanthine/uracil permease family protein; FUNCTIONS IN: transmembrane transporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Xanthine/uracil/vitamin C permease (InterPro:IPR006043); BEST Arabidopsis thaliana protein match is: Xanthine/uracil permease family protein (TAIR:AT2G34190.1); Has 8976 Blast hits to 8949 proteins in 1902 species: Archae - 67; Bacteria - 7337; Metazoa - 353; Fungi - 128; Plants - 443; Viruses - 1; Other Eukaryotes - 647 (source: NCBI BLink).
Link
InterPro Scan - TAIR