GT8984

CSHL Arabidopsis genetrap mutant lines

Original: GT8984

Phenotypes

Morphological phenotypes

Original description

  • dwarf mutant
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT8984

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21393660 [Map]; Strand: c
      • AT3G57740.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G57750.2 - [+] show detail - Protein kinase superfamily protein
        Distance: -319; Region: promoter
      • AT3G57750.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -364; Region: promoter
    Flanking Genome Sequence: GT8984 - 3-prime edge 
    ATGAAACCGA AGAACACAAG ATACGACGAA TGAAAGCAGT CCTTATGCTC 
    TCACTCAGAT GTACTGGTCA TAGAGGTGAT GTTCCAAAGA TGATGGAAGT 
    TGCCAAGGAA CTAAAAAGGA TTGAGAGATG GACATAGAGG AAACTTTTAC 
    AAAGTTTATT GTGTGCATTT GTATGAAGAG GGCTAACTGG TGGGCAGAGT 
    AGCTACAGTT AACTTATTTG CTCAATGTGT AATATTTAAG AAGATGTGGA 
    TCAAATTGAA ATATCTAATT ATGGGAGTAG AATGTATATT ATAAATGTAT 
    TGGGTCAATA TTTAATAACT AAAACGACAT GGATAAGATT ATAATATCTA 
    ATTTGTCGGA ATTTGACCAC TCAGTAGTTG ACTATCACAA ATCAAGTTTG 
    CTTCTTTCTA AAAGCCAAAG TTTCGAACTT TCTCCAATAG AGATGAGCAA 
    GAACAATAAG AAGAAGAGAA GATGGGATTT GAAGAACGGA GGGATTCTAT 
    TAGAGGAGCT AATCGCTTCC TTCGACGGCA AAACCAATCC GATTCGTTGC 
    TTCTCCTCCG ATCAGATCCT TAAAGCTACC GACAATTTCT CCGAAAGCCG 
    AATTATCTCC AGCTGGGGAT ACTTCATATG GTACAAAGGC GTAATCGAAG 
    AAAGACAAGT TTCAATCAAG AAATGGTCGA GTCAAAATC

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 21393507 [Map]; Strand: c
      • AT3G57740.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (CDS)
      • AT3G57750.2 - [+] show detail - Protein kinase superfamily protein
        Distance: -472; Region: promoter
      • AT3G57750.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -517; Region: promoter
    Flanking Genome Sequence: GT8984 - 5-prime edge 
    TCCAACATGT CAAAGATTCT TCCCTGTTCC ACAAATTTGG ATATCCAATC 
    TGAAATCCTT AGATTCATTA CATTTTGTTT GTCTTCAAAC TCTTCAAATA 
    GACTCTCATC TTCACTGCAA CAACAATCAA CCACTCCGTA CGTTCTTGTG 
    AAAAAGTTTT GCAACAACAC TCCAAAGCTA AAAACATCGG TATACTCGGT 
    GATCAATCCG GTCGCCGCGT AGTTATACTC TAGATAATCT AATGTTCCTT 
    CTACTCTATC AGCATGAACC TTAACAAATG TCTCTCCTTC TGGAATTGCG 
    ATACAAAGAC AAAAGTCACT TAGCTTTGCT GTCCCATTGG AATCCACGAA 
    AATGTTAAAA GGTTGTATAT CCGTATGAAT CATAGTTCTT GACAACGCGG 
    TGTGAAGGTA AGAAACCGCA ATCGCAATCT CTTTGGCAAT CTTTATTCGC 
    ATTCTCCACG GTAACAACAT TTCCGGGTTT GGAGTATTGA ATGGTATACG 
    TTCTGCATAC TCGCAAACTA AGACCGGATG CTCAAACTCA AGACAACATC 
    CTAACAATTT GAGGAAATTC TTGTGACCAC TAACCATTGA TGAGACCGCT 
    ATGTCACGAC AGATCTTTTC TAATGTATCA GATTTGTAGT AGTTCCATGT 
    GGCTCTTTTG ATAAAACAGG ACGGTTTTGG AGTATACCTC TGTACATAAA 
    GTTGAACCGA AT

AT3G57740.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57750.2); Has 31135 Blast hits to 30839 proteins in 1583 species: Archae - 4; Bacteria - 2835; Metazoa - 4267; Fungi - 840; Plants - 21255; Viruses - 28; Other Eukaryotes - 1906 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G57750.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57710.1); Has 51261 Blast hits to 50836 proteins in 2124 species: Archae - 20; Bacteria - 5135; Metazoa - 13711; Fungi - 2551; Plants - 24631; Viruses - 129; Other Eukaryotes - 5084 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G57750.2

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G57710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR