GT9031

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

tiny plants

Anatomical entity /structure development stage	Phenotypes
whole plant (PO:0000003)	decreased height (PATO:0000569)

Original: GT9031

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 42619 [Map]; Strand: c
- AT4G00120.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: 0; Region: exon1 (CDS)

CAAATGTCTA GCTAGCGCGC TCCTGTGTAG TTCATCAGGG TTGGGAGTTG 
TGGTAATAAC AAAGGTAAGA GGGGTCAGCC ATAGGAGCTC CAATCTGAGA 
GTGAGGCTGA AGAATCCTCA CCTGCCGTTT CAAGAACTTG GTGTAACGGA 
TGGCTTCGTC GAGCATGGAA GCTGTGTCCA TCTTCGCACC ACCAGGCACG 
ATCCTCTTGA GAATTCGGAT CTTCTCGCTG ATCCTTTCCC GACGCCGACG 
AGCAACCACC GTCTGAGGAT CGTCGCTTAT CCTTACGTTA CGGCGGTTCG 
GCTTAGGGAC CGTGGCAGGG TCGATGTCTA CGGGCTGCAT GACGGCGATC 
ATGTACTGCA TCTCCTTCAT CGCATCCATG TCTTCAT

AT4G00120.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: INDEHISCENT (IND); FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: polar nucleus fusion, regulation of transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT5G09750.1); Has 2280 Blast hits to 2276 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2280; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR