GT9042

CSHL Arabidopsis genetrap mutant lines

Original: GT9042

Phenotypes

Morphological phenotypes

Original description

  • sterile
  • sterile plant
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT9042

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 587237 [Map]; Strand: w
      • AT2G02220.1 - [+] show detail - phytosulfokin receptor 1
        Distance: -113; Region: promoter
    Flanking Genome Sequence: GT9042 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTATCTA AAATGGCAAT 
    AATCAGAAAA CCCATTTCGT ATACTCTCAG ATTTCTCAAG GGTTTTTGTT 
    GAATCTTAAT TCTTCTTCTC AAAGTTTCTT CCTTTATATT CTTCTTCTTC 
    TTCCTCTGTT CTTGAAATGC GTGTTCATCG TTTCTGTGTG ATCGTCATCT 
    TCCTCACAGA GTTACTATGT TTCTTCTATT CCTCGGAATC TCAGACCACC 
    TCCACGTGCC ATCCACATGA CCTCGAAGCC TTACGTGACT TCATCTC

AT2G02220.1

Model type
Protein coding
Short Description
phytosulfokin receptor 1
Curator Summary
Encodes a protein interacting with phytosulfokine, a five amino acid sulfated peptide (YIYTQ).
Computational Description
phytosulfokin receptor 1 (PSKR1); FUNCTIONS IN: peptide receptor activity, protein serine/threonine kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, response to wounding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phytosylfokine-alpha receptor 2 (TAIR:AT5G53890.1); Has 188205 Blast hits to 128830 proteins in 4018 species: Archae - 120; Bacteria - 18455; Metazoa - 56562; Fungi - 9680; Plants - 79633; Viruses - 405; Other Eukaryotes - 23350 (source: NCBI BLink).
Link
InterPro Scan - TAIR