GT9089

CSHL Arabidopsis genetrap mutant lines

Original: GT9089

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT9089

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 118647 [Map]; Strand: c
      • AT4G00270.1 - [+] show detail - DNA-binding storekeeper protein-related transcriptional regulator
        Distance: -70; Region: promoter
    Flanking Genome Sequence: GT9089 - 5-prime edge 
    CTGCTATTAA GTGACCCAAA TGATAGATTT TTGCAAGAGC AAATATTGTA 
    CTATTGATGA ATATTAAACA GCTAGAAAAA AAGATGAAAG TGTTTGTTTT 
    GTTATGAATG TTGAGAAAAG TATGGCCAAG TGTTACTCAT CCTATTTTGC 
    TTTTCTTCTC TCTCGACGAN NNACTTTTTA AAGGTCGTGA AGATTGGGAA 
    TCACTGCTCT GCATGCGCCC TGGGGGGGGC AAGTCTAAAG CAAGCAATAA 
    GCATGGTGAC TCCGAAGCAG ATCGATTTCT CTCCCTGTGT TGGTGCTGAT 
    AACTCCAACG GTACCCTCTC CCAT

AT4G00270.1

Model type
Protein coding
Short Description
DNA-binding storekeeper protein-related transcriptional regulator
Computational Description
DNA-binding storekeeper protein-related transcriptional regulator; FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: DNA-binding storekeeper protein-related transcriptional regulator (TAIR:AT2G25650.1); Has 282 Blast hits to 277 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 2; Plants - 255; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink).
Link
InterPro Scan - TAIR