GT9315

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

tiny plants

Anatomical entity /structure development stage	Phenotypes
whole plant (PO:0000003)	decreased height (PATO:0000569)

Original: GT9315

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 18912364 [Map]; Strand: w
- AT3G50870.1 - [+] show detail - GATA type zinc finger transcription factor family protein
  Distance: 0; Region: exon2 (CDS)

GATTGTNATA CGACTCACTA TAGGGCGAAT TGGGCCCTCT AGATGCATGC 
TCGAGCGGCC GCCAGTGTGA TGGATATCTG CAGAATTCGC CCTTGGTCGA 
CTGAAATGAA CGGAACACCG CCGTGAGCAC CGTCGGATTC AACGTTGTTT 
GCTACTCCAC TGCCGTAATC ATCCATGAAC CTAAAATGAA AACGGTCGGT 
AACGGTCGGT AAAATACCTC TACCGTTTTC ACTTTCATAT TTAACTTGCG 
GGACGGAAGG GCGAATTCCA

3 prime edge [+] show sequence

Chromosome: 3; Position: 18912246 [Map]; Strand: c
- AT3G50870.1 - [+] show detail - GATA type zinc finger transcription factor family protein
  Distance: 0; Region: exon2 (CDS)

GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCT TAGGTTCATG 
GATGATTACG GCAGTGGAGT AGCAAACAAC GTTGAATCCG ACGGTGCTCA 
CGGCGGTGTT CCGTTCCTTT CTTGGAGGCT TAATGTAGCG GATAGGGCAA 
GTCTTGTCCA TGACTTTACC AGATGAAAGG AGAATAGAAA ACGACGTTAG 
ATTCTCTTAA AATTTCCATG TGGTTTAATT ATGTCTAATT AAAAAAAAAC 
CAAGAAAATA TTTCTGAAAA AAAATAGAAG TGTATATCGA GAGACGATGT 
TGATGTTTAT TGATAGTGAC GGTCTAACTT ATGGTTTATC TATAAAGTAC 
CGTTCTGGTC AATTTTTAAA ATCATTTTCT AATATTTATT TTAAAAATAT 
AACCTTCTTT TTATGGAAAT CTTCTCTTCT CTAGCCTATC AAAATAAACA 
CTATAGTTAG ATTCTTCTAT TGATTA

5 prime edge [+] show sequence

Chromosome: 3; Position: 18912173 [Map]; Strand: c
- AT3G50870.1 - [+] show detail - GATA type zinc finger transcription factor family protein
  Distance: 0; Region: exon2 (CDS)

TACTTTCTCC CTTTCTCTTT GCCGGATAAT TACACGGAAC CCTCTGCGTC 
GAGTGGTGAT GAGCCCACGG AGTACCATTA TTATTGTTGT TATTAGTGGC 
AGCATGGTAA TTATTGTAGC CAGAGTTGTG ATGCCCGTAC TGGTCGGTTT 
GAACCGGTGC AGCTCCGACG ACGGTGTTTC CTGAAGCCGC AGTAGTTCTT 
CTCTCTTCCT TCTTGAAACG AATGCCGCAT GCGTTGCATA GGGACTGCAA 
ATTCCAAAAC CATCCATATC ATCATTAGCC ATCAATATAT CTTATATTTA 
ATGTTCGTTC AATACATAAA TCTCTATATA GTGATGAAAA TATTCGAAAA 
GAAAATAAAT TAATGTCTTT TATTGAAATA TCTGTTTTAA AACCTATATT 
CAAGTAAATT TACTGAACCA TCAAAATCAT TATTTAATGT TTCTTTCAAT 
AAATTAAACT ATAGAGAAAG GGATTTATTG GTTTTAGTGA AAAAACAGAT 
AGGCAAATAT TCAAAACAAA GGGATGAACT GTCTTTTTGG TTATTGTAAA 
TCT

AT3G50870.1

Model type: Protein coding
Short Description: GATA type zinc finger transcription factor family protein
Curator Summary: Encodes a GATA factort transcriptional regulator required to position the proembryo boundary in the early embryo.
Computational Description: MONOPOLE (MNP); CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type (InterPro:IPR013088), Zinc finger, GATA-type (InterPro:IPR000679); BEST Arabidopsis thaliana protein match is: GATA transcription factor 19 (TAIR:AT4G36620.1); Has 2164 Blast hits to 2065 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 372; Fungi - 903; Plants - 779; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).
Link: InterPro Scan - TAIR