GT9356

CSHL Arabidopsis genetrap mutant lines

Original: GT9356

Phenotypes

Morphological phenotypes

Original description

  • tiny plants
  • rosette leaves are dark green, rumpled, slightly asymetric. caluline leaves are dark green and twisted. inflorescence meristem appears to die before generating any flowers.
Anatomical entity
/structure development stage		 Phenotypes
rosette leaf (PO:0000014)
  • dark green (PATO:0001249)
  • wrinkled (PATO:0001810)
  • abnormal (PATO:0000460)
flower (PO:0009046)
  • abnormal (PATO:0000460)
cauline leaf (PO:0000013)
  • dark green (PATO:0001249)
  • torsioned (PATO:0002445)
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT9356

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10740059 [Map]; Strand: c
      • AT2G25210.1 - [+] show detail - Ribosomal protein L39 family protein
        Distance: 0; Region: intron1 (5UTR)
    Flanking Genome Sequence: GT9356 - 3-prime edge 
    CTCCTACTTT CTCCCTGATT TTGATGATCT ACTCTGCGTC AACCTTAATC 
    ATCTACACTG AATTTTATCT TAATGTTACG AAAGTTTGAG TCTTTGAATC 
    ATTTTTGATG ATATCTTCTT TGTATGAAAC AGCCGTCGCA CAAGTCGTTC 
    ATGATTAAGA AGAAATTGGG GAAGAAAATG AGGCAAAACA GGCCTATTCC 
    TCACTGGATT CGTCTTCGTA CCGACAACAC CATCAGGTTC GTAAATGGAA 
    CTGTAGATTC TCTTAGTTTG AATGATTAGG TTTAGAATTA GTGAATCTTA 
    AGTGGGTTTG TTTTGGTTTT ACAGGTACAA TGCTAAGCGT AGGCATTGGC 
    GCAGAACCAA GCTTGGATTC TAAGAGGTTT ACTTTTGCTT ATTGTGAGAG 
    CTTTGTTCTT TTGAAAAAGA CTTTGTTTTC TTTATCAGTT TTGATTGTTC 
    ACATTTGTGT AAGACGATCT TTAATCATTT ATGTTTCCAA AGTTTCCATT 
    GAAGAGTACT TATTGTAGTA ACATTGAGTT TTTCATTAGT TTAAAGATTT 
    GGAAATGACT TTTGGTTAAC TTGTTTAATT

AT2G25210.1

Model type
Protein coding
Short Description
Ribosomal protein L39 family protein
Computational Description
Ribosomal protein L39 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L39e, conserved site (InterPro:IPR020083), Ribosomal protein L39e (InterPro:IPR000077); BEST Arabidopsis thaliana protein match is: Ribosomal protein L39 family protein (TAIR:AT4G31985.1); Has 908 Blast hits to 908 proteins in 288 species: Archae - 195; Bacteria - 0; Metazoa - 389; Fungi - 107; Plants - 121; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).
Link
InterPro Scan - TAIR