GT9411

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

dwarf plants

Anatomical entity /structure development stage	Phenotypes
whole plant (PO:0000003)	decreased height (PATO:0000569)

Original: GT9411

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 1; Position: 5599641 [Map]; Strand: w
- AT1G16380.1 - [+] show detail - Cation/hydrogen exchanger family protein
  Distance: 0; Region: exon3 (CDS)

AAAACATCAC TTGAGTTATT TGACACTACC GAGGAGCTAC GAGTGTTGAC 
GTGCGTCTAT GGCGTTCGTC ATGCTCGTGG ATCGATCTCT TTAGTCTCTG 
CTCTAAGTGG CTTTTCTCCT GGAACTTCTT CTTCGCCGTT CACGCCTTAC 
CTTATGCACC TCATACCGCT CCCGAAGAAG CGGGGGCTGA ATTGTTGTAC 
CACGAATTAN ACGAAGATGC AGGAAATTCC AACGGCGGAG ACGATGAGTT 
CGGGACTAAT GAAGGACTAG AGATCAATGA CTCGATCGAT TCGTTTACTA 
GAGACAGAAA AATAATGGTC CGGCAGGTGA AACTTGTGGC GCCGATGGAG 
AATATGCACG AAGAGATCTG TAACGCCACT GAAGATCTTC GTGTATCGAT 
C

5 prime edge [+] show sequence
1. Chromosome: 1; Position: 5608934 [Map]; Strand: w
  - AT1G16410.1 - [+] show detail - cytochrome p450 79f1
    Distance: 0; Region: exon1 (CDS)
  - AT1G16410.2 - [+] show detail - cytochrome p450 79f1
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: GT9411 - 5-prime edge
```
TGATGAGCTT TACCACATCA TTACCATACC CTTTTCACAT CCTACTAGTC 
TTTAT
```

AT1G16380.1

Model type: Protein coding
Short Description: Cation/hydrogen exchanger family protein
Curator Summary: member of Putative Na+/H+ antiporter family
Computational Description: ATCHX1; FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 2 (TAIR:AT1G79400.1); Has 3057 Blast hits to 3030 proteins in 956 species: Archae - 198; Bacteria - 2123; Metazoa - 0; Fungi - 129; Plants - 509; Viruses - 0; Other Eukaryotes - 98 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G16410.1

Model type: Protein coding
Short Description: cytochrome p450 79f1
Curator Summary: member of CYP79F
Computational Description: cytochrome p450 79f1 (CYP79F1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily F, polypeptide 2 (TAIR:AT1G16400.1); Has 27252 Blast hits to 27093 proteins in 1494 species: Archae - 44; Bacteria - 2170; Metazoa - 10673; Fungi - 5027; Plants - 8510; Viruses - 0; Other Eukaryotes - 828 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G16410.2

Model type: Protein coding
Short Description: cytochrome p450 79f1
Curator Summary: member of CYP79F
Computational Description: cytochrome p450 79f1 (CYP79F1); CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 79, subfamily F, polypeptide 2 (TAIR:AT1G16400.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR