GT948

CSHL Arabidopsis genetrap mutant lines

Original: GT948

Phenotypes

Morphological phenotypes

Original description

  • tiny, green, vitreous seedlings
  • tiny plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
seedling (PO:0008037)
  • decreased size (PATO:0000587)
  • green (PATO:0000320)

Original: GT948

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 14919529 [Map]; Strand: c
      • AT5G37550.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT948 - 3-prime edge 
    AAACCTTATT CTCGGAGAGG ATCATGTTCT TGTTGGCCTC GACCTTATAC 
    CGCGAAGGTC GAGGTGTTCT TATGGCTCTT TTCGACAGAT CGAACTCTCT 
    CATCATCGGC TTTCCTTCGT GTCTTTGGTA CCGAGCCCAC GCCGCAGCTT 
    TCACTGTCGC CCGCTCATCC TCTCCTCCTC CTCCTCTTCC TCCTCCTC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 14919528 [Map]; Strand: c
      • AT5G37550.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT948 - 3-prime edge 
    GAAACCTTAT TCTCGGAGAG GATCATGTTC TTGTTGGCCT CGAGCTTATA 
    CCGCAAAGGT CGAGGTGTTC TTATGGCTCT TTTCGAGAGA TCGAACTCTC 
    TCATCATCGG CTTTCCTTCG TGTCTTTGGT ACCAAGCCCA CGCCGCAGCT 
    TTCACTGTCG CCAGCTCATC CTCTCCTCCT CCTCCTCTTC CTCCTCCTCC 
    TCCGGCAAAG AGCGTCGGTG ACCATCTCTT CTTTCTACTA TTG

AT5G37550.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G66190.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR