GT9736

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

tiny plants

Anatomical entity /structure development stage	Phenotypes
whole plant (PO:0000003)	decreased height (PATO:0000569)

Original: GT9736

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 18076579 [Map]; Strand: w
- AT4G38690.1 - [+] show detail - PLC-like phosphodiesterases superfamily protein
  Distance: -814; Region: promoter
- AT4G38700.1 - [+] show detail - Disease resistance-responsive (dirigent-like protein) family protein
  Distance: 0; Region: exon1 (3UTR)

GTTTTCATGA GCTGTTCTCC GATATGATGC TACTGTTTAT CATTATTAAC 
CGATTCATAT GTTCCGATTA AAACAATAAA AAGGCCAACT AAATCAATTA 
TTCAGATCAA AACTGAATTT TGCATGATCA AGAGATCAAA ATTGATTAAT 
TATGTTGCAA TCTTTCTTCT ACTTCGACAA AATCTATACT AGTAATCTCT 
TTTACATATC TTAGTTGTGT GGATCGTGAT ATTTGAGATA GTCTTACAAA 
AGACATGATA GGGCCTGTGA GTGTATATGA TTGGTTTTCC ATCGGATCCT 
ATCCGAATTT TATCCAAAAT ATTAATTATC GATGCCTTGT TTAAATTTTA 
GGAACGACTT TTATTTCATA GAAAATTTGA ATATGTGTCT TCCAAGAAAT 
AAAAATCACG TTGTATTGAT ATCTTTCACG TCGGAAAATA GCCAGGCATT 
AGAAATTGAC AAATAACAAA CAGTGAAGAC AGCTATACAA CAAAAATGGA 
CCTACCATAC ATTGTAAACC CACTCTCCCA TCAATTACAA CTCAACCACT 
CTTTCAATAT ATCTCAACTA ATCAATCAGT TCACATTTAT AACACTAAAA 
TGTTCCCACA ATAAAAAAAT AACAATAAAA TTTGTAACAG TTAATCTTAC 
ATATTAAACG CTACTACTTT TTTTCTATGG TTTTT

3 prime edge [+] show sequence

Chromosome: 4; Position: 18076609 [Map]; Strand: w
- AT4G38690.1 - [+] show detail - PLC-like phosphodiesterases superfamily protein
  Distance: -844; Region: promoter
- AT4G38700.1 - [+] show detail - Disease resistance-responsive (dirigent-like protein) family protein
  Distance: 0; Region: exon1 (CDS)

TAGAGGTATT TTACCGACCG TTACTTACCG TTTTCATGAT GCTGTTCTCC 
GATATGATGC TACTGGTTAT CATTATTAAC CGATTCATAT GTTCCGATTA 
AAACAATATT TAGGCCAACT AAATCAATTA TTCAGATCAA AACTGAATTT 
TGCATGATCA AGAGATCAAA ATTGATTAAT TATGTTGCAA TCTTTCTTCT 
CACTCGACAA AATCTATACT AGGAATCTCT TTTACATATC TTAGTTGCGT 
GGATCGTGAT ATTTGAGATA GTCTTACAAA AGACATGATA GGGCCTGTGA 
GTGTATATGA TTGGTTTTCC ATCGGATCCT ATCCGAATTT TATCCAAAAT 
ATTAATTAT

AT4G38690.1

Model type: Protein coding
Short Description: PLC-like phosphodiesterases superfamily protein
Computational Description: PLC-like phosphodiesterases superfamily protein; FUNCTIONS IN: phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: intracellular signaling pathway, N-terminal protein myristoylation, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946); BEST Arabidopsis thaliana protein match is: PLC-like phosphodiesterases superfamily protein (TAIR:AT4G34920.1); Has 888 Blast hits to 888 proteins in 280 species: Archae - 0; Bacteria - 676; Metazoa - 61; Fungi - 70; Plants - 52; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G38700.1

Model type: Protein coding
Short Description: Disease resistance-responsive (dirigent-like protein) family protein
Computational Description: Disease resistance-responsive (dirigent-like protein) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT2G21110.1); Has 865 Blast hits to 864 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 865; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR