K00404

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K00404

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K00404

Determination of introduced cDNA(s)

  • J023084G21 - Rice Full-length cDNAs - Original: J023084G21

    full reading [+] show sequence

    Nucleotide sequence: J023084G21 - full reading
    CCATGGGGCC CCACCTCGTC AGTGACCTAC TCTCCATTAA TTACGCTAAC 
    TCCTCACGTC GTCTCGCCCG CAAAATGCTT CTCTTCCTCC TCTTCCTCCT
    CGCCGCCGGC GAGGCCGCGG CGGCGGCGGC GGCCACCACG CTCACCGCGA
    CGCCGGCGAA GCTCACCCAG TCCGACCGCG AGATCACGAT CCGGTGGTCG
    GGCCTCCCGG ACCCGGACGG CCTCGACTAC GTCGGCATCT ACTCGCCGCC
    GACCTCCTCC GACCGCGACT TCCTCGGCTA CCTCTTCCTC AACGGCTCGG
    CCACCTGGCG CACGGGCACC GGCGAGCTCA CCCTCCCGCG CCTCCCCAAC
    CTGCGCGCGC CCTACCAGTT CCGCCTCTTC CGCTGGCCCG CGAGGGAGTA
    CTCCTACCAC CACATCGACC ACGACGGGAA CCCGCTCCCC CACGGCCGCC
    ACCGCGTCGC CGCCTCCGGT GAGGTCGCCT TCGACTCCCC CTCCCGCCCC
    GACCAGGTGC ACCTCTCGTT CGCCGACGGG GTCGACGAGA TGCGGGTCAT
    GTTCGTCTGC GGCGACGGCG GGAGGAGGGT GGTGAGGTAC GGGCCGGCGA
    AGGAGGAGGG GGAGGGCTGG AAGGAGGTGG CCGCGGAGGT GAGGACGTAC
    GAGCAGAAGC ACATGTGCGA CTCGCCGGCG AACTCCTCCG TCGGGTGGAG
    GGATCCAGGG TTCGTCTTCG ATGGACTCAT GAAGGGATTG GAGCCCGGGA
    GGAGGTACTT CTACAAGGTT GGTAGCAACT CTTCAGGATG GAGCGATACG
    TACAGCTTCA TTTCACGTGA CAACGAAGCC AATGAAACTA TTGCATTTCT
    CTTTGGTGAC ATGGGCACTT ATATACCATA TAACACCTAT GTCCGCACGC
    AAGATGAAAG CTTGTCGACT GTAAAGTGGA TACTTCGTGA TATTCAAGCC
    CTTGGAGATA AGCCTGCATT TATTTCACAC ATTGGGGACA TCAGCTATGC
    TAGAGGTTAT GCTTGGGTAT GGGATCACTT CTTCAACCAG ATTGAGCCTA
    TTGCTGCCAA TACCCCATAC CATGTCTGCA TAGGAAATCA TGAATATGAT
    TGGCCATTGC AACCTTGGAA ACCTTGGTGG GCAACTGGTA TATATGGAAC
    AGATGGTGGA GGTGAATGTG GCATACCTTA CAGCGTAAAG TTCAGAATGC
    CTGGCAATTC TTTTGTGCCT ACTGGCAATG GAGCTCCCGA CACCCGAAAT
    CTTTACTACT CCTTCGATTC AGGGGTTGTG CATTTTGTTT ACATGTCAAC
    TGAGACTAAT TTTGTTCAGG GCAGTGACCA ATACAACTTC ATAAAAGCTG
    ACCTAGAGAA GGTCAACCGA AGTAGAACTC CTTTCATTGT GTTTCAGGGC
    CACCGGCCAA TGTATACATC AAGCAATGAA GCTAGGGATT TTGCTCATAG
    ACAGCAGATG CTCCAGAACC TGGAACCACT CTTGGTAACA TACAAAGTGA
    CCCTTGCACT GTGGGGACAT GTCCACAGGT ACGAGAGGTT CTGCCCCATG
    AAAAACTTCC AATGTGTCAA CATGTCATCA AGCTTCGTAT ACCCTGGTGC
    CCCTGTTCAT CTTGTGATCG GGATGGGTGG TCAAGATTAT CAACCATTCT
    GGCAGCCAAG GAAGGATCAC CCTGATGTAC CTGTCTATCC GCAGCCTGAG
    AGGTCTATGT ACCGTGGTGG GGAGTTTGGA TACACAAAAC TTGTAGCTAC
    AAAGGAGAAG TTGACACTAA CGTACATCGG CAACCATGAT GGGCAAGTCC
    ATGATATGGT GGAGATATTC TCTGGGCAAG TATCTAATAA CAATGGTGTT
    CCTGAGGTGA TCGATGATAC AAAGCTCAGC ACAGGGGTCA GCACCAAACT
    GAAAATCCCT CTGTTCTCCT TGGAAATTGT AGGCAGCGTG ATGTTTGCAC
    TGGTTCTGGG TTTCTCTCTT GGATTTCTGA TCAGAAGGAA GAAAGAAGCT
    GCACAGTGGA CCCCAGTGAA GAACGAGGAG ACCTAAAATC ACACACTGTA
    TCTAATGCAA ATGCAAATGG TTTTTGATCA ACAACCTGTT TATAGGATCG
    TGCCCCATTT CTTGGGGCTC TACAGTGTTG TACTATAGTG CATAGAGTAT
    TGTAACATGT GCTGTGTCAA TCGTGGGCAT TGTAGAGTTT GATCAGCATA
    TCTGTTGCCG TGATTCTACG ATACATAAAG GTTTCAATAA GTGACATTAC
    GTTCACATCA ATTGGTTGGT ATGAGTGGTT AACC

    Gene models with high sequence identity

    1. AT1G13900.1 [+] show detail - Purple acid phosphatases superfamily protein
      E-value: 0; Score: 768.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Metallophosphoesterase 3.3e-17
    HMMPanther ACID PHOSPHATASE RELATED 7.6e-85
    Gene3D Purple acid phosphatase, N-terminal 0.00014
    Gene3D no description 8e-73
    superfamily Metallo-dependent phosphatases 4.3e-58
    superfamily Purple acid phosphatase-like, N-terminal 5.7e-21

    See the detailed result >

    AT1G13900.1

    Model type
    Protein coding
    Short Description
    Purple acid phosphatases superfamily protein
    Computational Description
    Purple acid phosphatases superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity, metal ion binding, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 9 (TAIR:AT2G03450.1); Has 1738 Blast hits to 1720 proteins in 355 species: Archae - 1; Bacteria - 507; Metazoa - 197; Fungi - 77; Plants - 727; Viruses - 0; Other Eukaryotes - 229 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR