K00432

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K00432

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
  • dark green (PATO:0001249)
    (Rosette leaf::Color::dark)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Shape::zigzag)
  • present in fewer numbers in organism (PATO:0001997)
    (Stem::Number::few)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K00432

Determination of introduced cDNA(s)

  • J033067N18 - Rice Full-length cDNAs - Original: J033067N18

    full reading [+] show sequence

    Nucleotide sequence: J033067N18 - full reading 
    GGCTGGGAAG CAGTTGACAA TCTCGGCGGA AAGCGGCGGC GGCGGCGATG 
    GCGGCGGCTG CGGGTCCGAT GGATCTGGTG GAGGCGGAGG CGGAGGAGCA 
    GCCGCCGGAC GAGGACGGCG ACGAGGAGGG GTACGTCGAG GCGGACCCCG 
    CAGGCCGCTT CATCCGGTAT GATGAGATCG TGGGGTCAGG GGCCGTCAAA 
    ACGGTCTACA AAGCCTTCGA TAAGCTGGAG GGTGTCGAGG TAGCATGGAG 
    CCAATCCCGG ATCGATGACT CTGTCATGGG GTCCTCTAAG AAGATGAAGC 
    AACTAAACAC AGAGATTCAA CTTTTGAAGA CACTCAAGCA TAAGAACATT 
    GAGAAAATGT TTGCTTCATG GGTTGATGGG GAGAAGAAGA CTGTTAACAT 
    AATCACAGAG TTGTTCACAT CCGGGAGCTT GACACAGTAC CGCAGAAAGC 
    ACAAGAAAGT GAATATGAAG GCTATGAAAC GATGGGCAAT ACAGATATTA 
    ACAGGGCTAG AATATCTGCA CAGTCAGAAG CCAGCAATTA TACACAGGGA 
    TTTAAAATGT GACAATATAT TCATAAATGG AAATCATGGG AAAGTGAAGA 
    TTGGTGATTT TGGTTTGGCA ACATTCATGC AGCAACAGAA AAAAAGTATA 
    AAAGGCACCT TAGAATTTAT GGCACCAGAG CTGTTAACTG GGCATTACAA 
    TGAATTGGTT GATATATATT CATTTGGGAT GTGCATGCTT GAAATGGTGA 
    CATGCGAATA CCCATACAGT GAATGTCAAG GCATGGCCCA TATATTCAAA 
    AAGATTGATG AGGGTAAGAA ACCAGCTGCG TTCTACAAAA TTAAAGATGC 
    AGAAGTAAGA TCTTTCATAG AGAACTGTTT AGCTCCAGTA GAGAACAGAA 
    TGTCTGCAAC AGAGCTGTTG AAAAGCTCTT TCCTCCAGGA TGATGATCTT 
    ATCTCAGTCT CTCTGGTCAA GAATATGTCT GAAGATGGGC AGCAGCCTGT 
    CAGTTGCATG CTTCGTAAGG GCGAGTTTCT GCTGACAGGA AATGTTGATG 
    TAGCCAGCCA TGTTGATTTA TGGCTAAGAT TTCCTGATCC CAGCGGTTGT 
    TTCAAGAGTG TTGAATTCCC ATTCAATTTG ACTGAAGATA CAAGTCTTTC 
    TGTGGCTGTG GAAATGGTTG AGCAATTTGG ACTGACACAA GACAGCAGAC 
    CGATCATCGC GCAGTTGATC GATGCATTCT TGGTCATCCT GATTCCTGAA 
    TGGACACCGT GTGTCGCCAT CCGTCAGGTG GTTTCTGAGG GTGCAAACGG 
    CTTGACAATT GAGAAGCGCT GACCGAGAGT GATTCTGCTT CCCCAACCGC 
    TGCTACTAAC TAATAGTCAT AGTTGGCTTC GCTGGTTATG TATCCTTATA 
    GTATTTTCTT TTAGATGGAG TGGACCTTAT GCTTTAGCCA CCTGTGGGCA 
    CTCATATTAC AATGCCCTCG AGATGTGCTG CTGAGCATGG AGTTCCTCCG 
    GTGGTGATGA TGATGAAAGT TAGGTCTAGT TCAGATAATT TATTTGCTAG 
    GAAGGAGCAG CAAAAATGAG AGTAATCAGT CGGAAATGTT GGGTTTTTTT 
    TCATCTTTAA TGCAATTGCT GAATTAGTTG TGGC

    Gene models with high sequence identity

    1. AT1G49160.2 [+] show detail - Protein kinase superfamily protein
      E-value: 1e-108; Score: 390.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Serine/threonine-protein kinase-like domain 4.7e-53
    superfamily Protein kinase-like domain 1.1e-62
    PatternScan Serine/threonine-protein kinase, active site 0
    HMMPanther SERINE/THREONINE-PROTEIN KINASE WNK-RELATED 8.4e-126
    HMMPanther SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO 8.4e-126
    HMMSmart Serine/threonine-protein kinase domain 5.9e-58
    HMMSmart Tyrosine-protein kinase, catalytic domain 6.6e-15
    Gene3D no description 7.7e-20
    Gene3D no description 1.1e-44
    ProfileScan Protein kinase, catalytic domain 40.174

    See the detailed result >

    AT1G49160.2

    Model type
    Protein coding
    Short Description
    Protein kinase superfamily protein
    Curator Summary
    Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its
    Computational Description
    WNK7; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 6 (TAIR:AT3G18750.3); Has 108759 Blast hits to 107794 proteins in 3536 species: Archae - 87; Bacteria - 10756; Metazoa - 40181; Fungi - 10521; Plants - 29052; Viruses - 410; Other Eukaryotes - 17752 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR