K00450

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K00450

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K00450

Determination of introduced cDNA(s)

  • J033091E11 - Rice Full-length cDNAs - Original: J033091E11

    full reading [+] show sequence

    Nucleotide sequence: J033091E11 - full reading 
    TGAGTGGTAG TAGGCTAGGC TATATCCGCC TCGGCCACCG CCGGGTTCGC 
    CTCCAGTGCT CGCCGCCTCC GCCGCCGCCG GTGTCCATGG CCGTGGCCCT 
    TGCCGGCGCG AGATCCCCAG GAGCGGGCGC GATCCTCAGC CTCCGCCGCC 
    TCGCCCCCGC CGCCGCGGCG CCCGTACGTC TGGGCGGAAG CGGAACCCCA 
    GGCACCCGGC GCCGCCGCGG CATCGCCATG GCGGCAGCTG CGTCCGCCCC 
    GCCCGCGCCC GCCGATGCCC TCCCCAAGGG TGCTGATTCA TTTTTCCGGA 
    CAGTTATCTC AAACATGGAG AAAGTATATC TGAGCAGAAA TCCAACTGCC 
    AAAACCATCC TGGAACTTGT TCGTTCTTAT GATGGGGACC ACATTTGCTA 
    TGATCATTTT GCTTTCAGAA CATTTGGAGT TGATGGTTAT GGTATAAAAT 
    CACTTGCTGA ATTTTTTACT GACTTTGGTT ATGTCCCTCG TGAAGAACTA 
    AGGTTTCCAG CAAAAAAGTT AAGAGCACTA TGGTTTTCTC CTCCCACCAA 
    TGATGGATAC ACTGGAACTG GTGTTTATGG GCCTTTGCCA AGGATATTCA 
    TTTCAGAACT ACTTGTGGAT GAGTTGAGTC CTCAGAGCCA GGACATCATT 
    CAAAAATACA TTAGAACTTC TGGTAAAGGA AATAAACATG CAACTCTTGC 
    AAGTACATCA GGGGAGCTGA CATGGGAGAA GCCCATTTAT TCTGATTTCC 
    AAGTTTTATC TAGGGAAAGT GAATATGCTG CATGGACTCT TGTTAATGGC 
    TATGCACTAA ATCATACCAC AATTTCCACT CATCGCTTGA TATCAGATAT 
    TAGAAGTATC AATAAGTTCA ACAAATTTGT GGAGGACAAT GGGTTCAAGT 
    TAAATTCAGA AGGAGGGATT TTGAAAGTGA GTCCTGATGG TCTCCTCCAG 
    CAAAGCTCAA CTGTAGCTGA TTCAGCGTTG TTTACTTTTG CTGATGGAAT 
    CACTGAATCC ATTCCACGTT CCTATATTGA ATTTGCTGAA CGCCTGGTAC 
    TCCCACAGTT CAAAGATTTG CCAAATGATG AGGTCAACGA ACACCACAGG 
    CGCGATGGTT TTGAGGTAGG GAATGCGGAC AAAATATTTG AGAGCACATC 
    AAATGATCAG CTTACACGGA GATCTGCATA AACGTTGAAG TCTCAACTAT 
    TCTGGAAGCG AGTCATGCCT CTTGGAAGCG TATTGAAGGA GTGTTCTCTG 
    TGATAACTGT ATCTACCTGG GTAAATTAAA ACATTAGAAT GAATAAACTG 
    TTCGATGTAT ATCGCTCTCT TGAATAAAGA AATTACTAGT TATCTCT

    Gene models with high sequence identity

    1. AT1G07040.1 [+] show detail - unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: ...
      E-value: 6e-117; Score: 417.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G07040.1

    Model type
    Protein coding
    Computational Description
    unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27030.1); Has 540 Blast hits to 538 proteins in 187 species: Archae - 0; Bacteria - 333; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 140 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR