K00503

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K00503

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
cauline leaf (PO:0000013)
  • abnormal (PATO:0000460)
    (Cauline leaf::Others)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Others)
T2  
cauline leaf (PO:0000013)
  • present in fewer numbers in organism (PATO:0001997)
    (Cauline leaf::Number::few)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
  • dark green (PATO:0001249)
    (Rosette leaf::Color::dark)
fruit (PO:0009001)
  • decreased length (PATO:0000574)
    (Silique::Shape::short)
  • abnormal (PATO:0000460)
    (Silique::Others)
stem (PO:0009047)
  • increased thickness (PATO:0000591)
    (Stem::Shape::thick)
  • decreased thickness (PATO:0000592)
    (Stem::Shape::thin)

Invisible phenotypes

Original: K00503

Determination of introduced cDNA(s)

  • J023004O08 - Rice Full-length cDNAs - Original: J023004O08

    full reading [+] show sequence

    Nucleotide sequence: J023004O08 - full reading
    TGGGGGCCAT CCTCTTTCTC TGAGGATCAT CATGCCTTGA GGAGAAGCAT 
    TGCTGAATCC TCTTGGCGGC CCCCTTGCTT ATCACACACA AAATTCGGCC
    ACACCAACAA AATCGGCCTA AAGCATGACA ATTTGCACCT CATAACCAGA
    ATTTGCAGGA GGCTTCAGGC GTTTTCAACA GACATGAAGG CCTGGCATTA
    CTGACAACTA TTGTTGAGGG TGGTGGAAAC TGCAATCCTG CTAGTGATCC
    ATTACCAAAC CAGTCCCTGT TGTCAGCAAG CATCATTAAC AAGATCCTCC
    ATCTGATAGA TGCTCTAGAT CTGCTATGCC GAAGGTCATA CATTGCGTTG
    GATCAGTTGC TTTTGGATAC CCAAGAAGCG CTGAAGATCG CATACCCGAA
    ATGTTTATCA GGCTTATCTG CATACCACAA TACTTCCTCT ATCAGAAGGA
    AACCAAAGCT GTAATTTTAT TCTGAGGTTA GCGCTGCGCG CAAAGAAATC
    CGCGACGAAG CTGAAGCGAT CGGCAGAGAT GGGGAGCATG TACCGGCATC
    TGCGTGACCG ATCTAGTAGA AGGCGGCGCT TCTCACCTGC ATGGCGGCAA
    GAGCTCGCGC GACAAGAAAG CCCGGGCGTC GCCGGCGGCC GGCGCCAAGG
    GCGGTGGTGC AGGTCATGGC ATGGCCGACG CATCGGCCGA GATGACCAAG
    AGATCGGCCT ACTTCCGGCA AATCGAGGAG GACGTCGGAA CCCACCCGGC
    GGCGATCCTG GAGCTGAAAG ACGCCGTCGG CGCGTTCCAA TCCATGGACA
    TGGGCGAGCT GGCGAGGTTC CACTGCAGCT CGCGTGCCTG ACCGACGAGA
    CGCAGGTTCG AGGGCTTCCC TTCAAAGAAG CTGGAGGCGC TGAGAATGGC
    CGCGGCGCTC TACTCCAAGC TGGACGGCGT CGTTGCCACG CCGAGTATTT
    TAAACATGCA AAAAAAAAAT TCTTACTTTT TGAAAAATAT GTATATATAT
    AAAGGTCTTG TTTAGTTGGG GAAAATTTTT AGGTTTGATT GTCATATCGA
    ATATACGGAT ACACATTTGA AGTATTAAAC GTAGTCTAAT AACAAAACAA
    ATTACAGATT TCGCCT

    Gene models with high sequence identity

    1. AT4G04980.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11070.1); ...
      E-value: 1e-16; Score: 84.30

     

    InterPro Scan Digest

    See the detailed result >

    AT4G04980.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11070.1); Has 23100 Blast hits to 15699 proteins in 1063 species: Archae - 116; Bacteria - 2262; Metazoa - 8308; Fungi - 3268; Plants - 3181; Viruses - 958; Other Eukaryotes - 5007 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR