K00505

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K00505

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K00505

Determination of introduced cDNA(s)

  • J023039H22 - Rice Full-length cDNAs - Original: J023039H22

    full reading [+] show sequence

    Nucleotide sequence: J023039H22 - full reading 
    GTAAAATGTC TTTCATGCTT CTTCTTCTTC TCCTGCTCTC CCTCATCCTC 
    AACCTTGCAT CCCCGACCAC CGCCGCTTCC GGCGACGGCA ACGGCGACCA 
    GTTCATCTAC TCCGGCTTCC ATGGCTCCAA CCTCACCGTC GACGGCGCCG 
    CCTCCATCAC ACCGGACGGC CTCCTCCAGC TAACCGACGG CGCAGCCTAC 
    CTCAAAGGCC ACGCGTTCCA CCCATCTCCG GTGCGCCTCC GCCGCGACGT 
    CTCCACGTCC ACGACGACGA CCACCGTCCG CTCCTTCTCC GTCACCTTCG 
    TCTTCGGCAT CGTCTCCGTC TACCCCGACT TCAGCGCCCA TGGCATGGCC 
    TTCGTCGTCT CCCCGACAAC CAACCTCTCC TCCTCCTTGC CGGCCAAGTA 
    CCTCGGCCTC ACCAACGTCC AGAACGACGG CAACGCCAGC AACCACATGC 
    TCGCCGTCGA GCTCGACACC ATCCAGAGCG TCGAGTTCAG GGACATCAAC 
    GCCAACCACG TCGGCGTCGA CATCAACGGC CTCCAGTCCG TCCGCGCCTA 
    CAACGCCGGC TACTACGACG ACGTCTCCGG CGAGTTCAGG AGCTTGAAGC 
    TGATCAGCCG CCAGGCGATG CAGGTCTGGG TGGACTACCA TGGCGGCGAG 
    AAGAAGCAGC TCGACGTCAC CATGGCTCCT CTCAGAATGG CCAGGCCTGT 
    CAAGCCGCTG CTCTCGGTCA CCCACGACCT CTCCACGGTG CTCGCCGACG 
    TCGTCTACCT CGGCTTCTCG GCGGCGACCG GCCGCGTGAA TTCGCGCCAC 
    TGCGTTCTTG GCTGGAGCTT GGGGATCAAC GGACCAGCTC CCGCCATTGA 
    CATCGACAAG CTGCCCAAGC TTCCTCGTGC TGAACCCAAG CCAAGATCCA 
    GGGTCCTTGA AATTGTTCTA CCAATTGTCA CTGCAACGAT TGTGCTGGTT 
    GTGGGTGGCG CCATTGTTAT GGTGGTGAGG AGGAGATCGA GGTACGCCGA 
    GCTACGGGAA GATTGGGAGG TTGAGTTTGG GCCGCATCGA TTCTCGTACA 
    AGGAATTGTT CCGCGCAACC GATGGATTTG CGGATAAGCA TCTACTCGGT 
    TCAGGAGGAT TTGGAAAGGT GTACCGAGGA GTGCTTCCTA AATCTAAATT 
    GGAGGTTGCC GTGAAGAAAG TGTCCCACGA ATCGAGACAA GGGATGAAGG 
    AGTTTGTTGC TGAGATAGTT AGTATTGGAC GTATTCGGCA CCGTAATCTT 
    GTGCAGTTGC TCGGTTACTG TCGACGGAAG GGTGAGCTTC TTTTGGTGTA 
    TGCGTATATA CCAAATGGTA GCCTCGATAA ATATCTGTAT AGCGAGGAGG 
    ATAAGCCTAT ACTGAGTTGG GCTCAAAGGT TCCGAATCAT TAAAGGCATC 
    GCATCTGGTT TGCTCTACTT GCACGAGAGG TGGGAAAAAG TGGTAGTGCA 
    CCGAGACATC AAGGCAGGCA ACATACTCCT CGACAAGGAC ATGAACGGAC 
    AGCTAGGTGA CTTTGGCTTG GCAAGACTAT ACGACCATGG CACGGACTCA 
    CAAACCACAC ATGTGGTTGG CACCATGGGA TACCTAGCAC CAGAGCTCAT 
    TCGCACGGGC AAAGCATCCC CTCTCACCGA TGTGTTCGCG TTCGGCGTGT 
    TCCTCCTCGA GGTCACCTGT GGGCAGAAAC CTATCAAGGA GAAGAACCCT 
    CAAGGTAGCC ACATAGCGCT GGTCGACTGG GTGCTCGAGC ATTGGCGCGA 
    CGGTTCACTC ATGGACACGG TGGACGGGAG GCTCCACGGC GAGTACGACG 
    CCGGTGAAGC GGCGCTGGTG CTGAAGCTGG GCCTCCTGTG CTCGCACCCG 
    TTCGCCGCGG CGAGGCCCGG GATGGGGCAG GTCACCTGCT GCCTCGCCGG 
    CGAGGCGCCG CTGCCTGAGC TGACGCCGGC GGACATGGGC TTCGACGTGC 
    TGGCCATGAT GCAGGATAAG GGATTCGACA CGTCCGTCGT GTCGTATCCC 
    GATCTTATGA CGAGCTTTGG CACCATCTCC AGCCTCTCAG GAGGAAGATA 
    ACTCGGCTTT TTGTATATAA GTTTCATACA AGTTCATCGG TCACGACCAG 
    CAGTTGTGGA TTAAAATTTT TTGAACGTTT TTAGATAAGC TAGAATAATT 
    TTTGAACTAA TTTAGGCCAA CTCTAGACTT GCAGTATAGT AGACAGAGCA 
    ATGAAAGCAG AGGACTCTGT TTTCCATTGG TATCATCAAT GAAAGATGCA 
    GAGTCTCATT TAGACTGAAG AAAAAAATTG GAGTAGTCAC CCTCTTTGCT 
    GAAATTATAG ACTGAAACAT TCATCTGTTC AATTCAAATG TCATACAAGA 
    AATTGATGCC C

    Gene models with high sequence identity

    1. AT2G37710.1 [+] show detail - receptor lectin kinase
      E-value: 0; Score: 638.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D Concanavalin A-like lectin/glucanase, subgroup 9.3e-66
    Gene3D no description 1e-24
    Gene3D no description 3.3e-46
    HMMPfam Legume lectin, beta chain 2.5e-74
    HMMPfam Serine/threonine-protein kinase-like domain 9.4e-49
    HMMSmart Serine/threonine-protein kinase domain 5e-33
    HMMSmart Tyrosine-protein kinase, catalytic domain 4.4e-29
    superfamily Protein kinase-like domain 1.5e-80
    superfamily Concanavalin A-like lectin/glucanase 2.8e-76
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    PatternScan Legume lectin, beta chain, Mn/Ca-binding site 0
    ProfileScan Protein kinase, catalytic domain 36.683
    HMMPanther SERINE/THREONINE-SPECIFIC KINASE LIKE PROTEIN 1.1e-198
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 1.1e-198

    See the detailed result >

    AT2G37710.1

    Model type
    Protein coding
    Short Description
    receptor lectin kinase
    Curator Summary
    Induced in response to Salicylic acid.
    Computational Description
    receptor lectin kinase (RLK); FUNCTIONS IN: kinase activity; INVOLVED IN: response to salicylic acid stimulus; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Legume lectin, beta chain (InterPro:IPR001220), Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Concanavalin A-like lectin protein kinase family protein (TAIR:AT3G53810.1); Has 113290 Blast hits to 111820 proteins in 4637 species: Archae - 92; Bacteria - 13273; Metazoa - 41290; Fungi - 9298; Plants - 33316; Viruses - 357; Other Eukaryotes - 15664 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR