K00840

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K00840

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Adult plant::Plant height::short)
rosette leaf (PO:0000014)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)
stem (PO:0009047)
  • decreased thickness (PATO:0000592)
    (Stem::Shape::thin)
stem internode (PO:0020142)
  • increased length (PATO:0000573)
    (Stem::Shape::long internode)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K00840

Determination of introduced cDNA(s)

  • J023083K21 - Rice Full-length cDNAs - Original: J023083K21

    full reading [+] show sequence

    Nucleotide sequence: J023083K21 - full reading 
    GGCCGCTGCT GCTGCTGCTG TTCTCCCCTC CCGGATTGAA CTGTTGGCAA 
    GTTCTGAAGG ACTCTCCAGT TATTGGAGAA ATGTGTGGAC GGCTTGCAGG 
    CTGATGAGCA TCCAGACATG CTGACGCTAC ATGGAACCGC TCTGTTCATT 
    AGGCCGAGTG CTTACCAAGA GGTCAAGTCA TCACCAAAGC ATGCCATAGT 
    TCCTCATAAC AACCTATTAG GTTGCAGTGC GTTTTATAAT CCAGTGGAAG 
    GGCATCATGT GCAGAAGCCG CACATCGTTC CTAGCTGCAA AGTTAACTTT 
    ACCAGGGCGA GCCATTATCT CTATAGAAGT TTAAGTGAAA GAACTACAAG 
    GCATTGGCTG CATCGGTTTC ATGTTAACGC TTCGTCGGAT GAGGACTTCC 
    GCTCATCACG CAATATAGCA ATCAGCCTAT TCAAGCGATA TAAAAATGTC 
    ATTGACCGAG GAGGTGGAGA TAACCTGAAG GAGTTTGTTA GTGCTGGGGT 
    GAATGCATAT GCTCTAGGCT GTACTGAAGA GGGGCTCAGG AAGGAACTTA 
    TGGATATTGA AGATTCTGGC CTTGAGATTG AAGCTCTGCG GTCCAATGGA 
    GGAGGAACCA GCTTGACCTT CAAAGTTCAC TCCTTTGAGG TCCGTGAATG 
    CATCCTGTGG CTCAGTATAG TATTCATTAC AATCCTGTGC ACACCACAAC 
    CAACGATCAT CAGATGGTCT ACTACCCCAC CAGTGTCAGC TGACGTTTTG 
    CATCAGTGGA AAGGATTTTG TGCCTTAATA GCGAACGCTT ACTATACCAA 
    AGGAATGGCA TGGTTACCAG TGAAAACTTT GCAGCTGGAA CAAATGGCTG 
    TCACGGGCAG TTCAGAGGAG CCATCAGTAG TAGCTAGTCG CATGCAATTA 
    GTTTTCAGTA CATTAGAGGT AGTTAGTCCT CAATGGCCAA GAGTGTGATG 
    AACTGAAACT GAAAGCACGT GTGCAGTTTT ACTACATGCT CATGTCTGGC 
    AAAGAGGAAA AAATGGCATC AGGAACGAAT CATTTTTTTT CCTTCCAATT 
    TGAAGTAAAA TGTCCAGATG TGCAAATGTA TACTACAAAC AGATCTCCTT 
    ATATACTGAG ATATTGATCA ATACATGTAC AATTTACTTT TT

    Gene models with high sequence identity

    1. AT1G62250.1 [+] show detail - unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15...
      E-value: 4e-79; Score: 291.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G62250.1

    Model type
    Protein coding
    Computational Description
    unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30 Blast hits to 30 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR