K01027

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01027

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01027

Determination of introduced cDNA(s)

J033022G13 - Rice Full-length cDNAs - Original: J033022G13

full reading [+] show sequence

GATCCCGCGA GGCAGCCGCA ACTCGCCATC ACCACCTCCC GATCCGCGCG 
CTTTCTCTCC CGCGCCCCCT GCGGATCTGC CGGCTCTGGA AGGGCGAGAG 
GGCGCTGGAG TCGTCTCGGC GGCGCTAGGG TTGAAGCTGG TGGGGGAAGG 
AGGAGGAGGG GCATGAGGAT TAGCGAGCTG GGAGAGTGTG ACGGGGTGCG 
GTCGGAAGGG GAGGAGGAGC AGCAGGTGGT GGTGGAGGAG GCCAGCGTCC 
GCGGCGGCGT GGTGGTAGCG CGGCTGAGCG CGAAGCGTGC GCTCGTCGGC 
GCCGGCGCCA GGGTGCTGTT CTACCCGACG CTGCTCTACA ACGTGCTGCG 
CAACCGGTTC GAGGCGGAGT TCCGGTGGTG GGACCGAGTC GACCAGTATA 
TTTTGCTAGG TGCTGTTCCT TTCCCAAGTG ATGTTCCACG TTTGAAGCAA 
CTTGGAGTTC AGGGAGTTGT AACATTGAAT GAGGCTTATG AGACCCTGGT 
CCCAACATCT TTATACCAGG CCCATGGGAT TGACCACCTT ATTATTCCCA 
CAAGAGACTA CCTGTTTGCA CCAGCCCTCC AGGATATTTG TCAAGCCATA 
GATTTTATCC ACCGGAATGC ATCAGAAGGT GGCATTACTT ATGTTCACTG 
TAAAGCTGGA AGAGGGCGTA GCACGACTAT TGTTTTGTGT TATCTGATTA 
AATATCGGAG CATGAGTCCA GAAGCAGCAT TAGATCATGT CCGATCCATT 
AGGCCTAGAG TACTTTTGGC ACCATCGCAG TGGCAGGCTG TCAACGTTTT 
TAGTACCCTC ACCACCGGGC GTCTTCCAAT ACAGAGTAAA AACCTGGGCC 
ATTTTCTAGA AGCCGGGGAT GACTGCATCA CCAACTCAGA AATTGATGAT 
TACTACTCCA TGGAGCTTGA TTACGAAGAT AGTGGTTTAC CCCTTTGTCA 
AGTAATGTTA CCCAGGCCAA CGAGCCCTAC AGTGTGTACT GACGCAGTAC 
TCATAACAGA AGCGGACCTC GAGGGATATG ATACTTATGC CGATACCAGG 
AAGGACGTTG TGTCGTTGGA AGTGATAGTC AGCCGGAAGC CCATCATGAG 
AAGACTATCA TGTCTCTTTG GATCTCTGAA ACTTACCAAC AATTGTGAGC 
CAACCCCAAG CCGGTTTGCT GAGGTTCGGG CCTGCTAGGT AAACCAGCAG 
GCTTTTATGC AGTTTTCAAT GCTGTGAATC AAGGGTACAT AGTAGTAGAT 
AATAATAGGC AGTTAGCCTG TTAGACATGG TAGAAACAGT GATGTTTCTA 
CTTTCTCTTA TCGCGGCAAT GCCACCGGGA AGAAAATGTG TGCATAGTGA 
GTTTGGAGAG TGTAGAGATG TGGATGTGCG GATTGTCCTT GTTTTTTAAC 
CCTGAAAACG TGAGATTTCA CTTAATGGTT GTTTCTCCGA TCGGAATAAA 
AAGATGTCCA TGTTCCATGT C

Gene models with high sequence identity

AT2G35680.1 [+] show detail - Phosphotyrosine protein phosphatases superfamily protein
E-value: 6e-74; Score: 275.00

InterPro Scan Digest

Program	Description	E-value
HMMSmart	Dual specificity phosphatase, subgroup, catalytic domain	1.8e-09
ProfileScan	Dual specificity phosphatase, subgroup, catalytic domain	20.325
ProfileScan	Dual-specific/protein-tyrosine phosphatase, conserved region	15.312
HMMPanther	PTEN-RELATED PHOSPHATASE (PLIP)	3.4e-86
HMMPanther	DUAL SPECIFICITY PROTEIN PHOSPHATASE	3.4e-86
HMMPfam	Dual specificity phosphatase, catalytic domain	1.1e-17
Gene3D	no description	1.3e-32
superfamily	(Phosphotyrosine protein) phosphatases II	8.6e-39
PatternScan	Protein-tyrosine phosphatase, active site	0

See the detailed result >

AT2G35680.1

Model type: Protein coding
Short Description: Phosphotyrosine protein phosphatases superfamily protein
Computational Description: Phosphotyrosine protein phosphatases superfamily protein; FUNCTIONS IN: phosphatase activity, protein tyrosine phosphatase activity, protein tyrosine/serine/threonine phosphatase activity; INVOLVED IN: protein amino acid dephosphorylation, dephosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422); BEST Arabidopsis thaliana protein match is: Phosphotyrosine protein phosphatases superfamily protein (TAIR:AT5G56610.1); Has 1976 Blast hits to 1976 proteins in 288 species: Archae - 41; Bacteria - 150; Metazoa - 1097; Fungi - 157; Plants - 204; Viruses - 23; Other Eukaryotes - 304 (source: NCBI BLink).
Link: InterPro Scan - TAIR