K01120

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	whole plant (PO:0000003)	decreased height (PATO:0000569) (Adult plant::Plant height::short)
	cauline leaf (PO:0000013)	desaturated green (PATO:0001272) (Cauline leaf::Color::pale)
	rosette leaf (PO:0000014)	desaturated green (PATO:0001272) (Rosette leaf::Color::pale) present in fewer numbers in organism (PATO:0001997) (Rosette leaf::Number::few) abnormal (PATO:0000460) (Rosette leaf::Others)
	stem (PO:0009047)	desaturated green (PATO:0001272) (Stem::Color::pale) abnormal (PATO:0000460) (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01120

Determination of introduced cDNA(s)

J013130C21 - Rice Full-length cDNAs - Original: J013130C21

full reading [+] show sequence

GAGATTAGAG GCAAGGCAGG CAGGCAGGCA GGGCTCGAGC TCCCCCTTCC 
CACACCCATG TCCTCCTCCG CCTCCTGCCT CGCCCCTCCC CCTCTTCGTC 
TCCCGTGCTC CTCCTCCTCC TCCCCCTCTC CCGCCGCCGC CGCGAGGTTC 
GGTTCTCGGA GGAGGGCGGT AGCCGCGGCT GCTCCGGCCA AGGGATGGAG 
GCTGGTGCGC GTCTCCTGCT TCAGGCAGGA GGATGTCCCG ACGACGTCTG 
ACGACGGGCC CGGCTTCGAG CACATCTCGC GGCCGGAGAG CTCGCGGGGC 
GCGGAGGCGA GTGGGGAGGA GGGGGAAGGG GAAGGGGAAG GCTCGAGCGG 
GCAGCGTGAG CGCGGTTCCG GGGAAAGGGA TGATTGGTTC CTCAGAGCGC 
AAGAGATAAA GAGAAATTTA CGAGAAAGAA TATTCAGATT TCAGACTCAA 
CGATGGACTG TACCTTGGAC CGGAAAAACC ATTGCTCAGG TCATGATTTT 
ATGGATTGCC ACATTTTGGT TTGTGGGTTC CTGGATAGTG CCATTTTTGG 
CTCATGCTGC TGGCTTTAGC AAGGAATCAT TGACACATAG GGGCCAAGCA 
CTCTATAGCC TCTTGACGGA CATAACTGGA GGCCTTGCTG GAATTGCTAT 
TCTTCACCAT TGTCTTGGTA GATTTCGTCC CCTTCCTCCA GGCTGGTTTG 
AGTTCAATTT GAAGGGCAGA TGGTATTTGG ATGTAGCGTT GGGGTGCCTG 
TTATTCCCGC TGGTCAATTT TCTCTCTCAC ATCAACATCA ACCTAATACC 
AATGTCATCA GGGCCAGTCC CTGGGGTTTC CAGTGTAGAA CAGTCCATTG 
TGGCCCGTGA TCCAGTGGCG ATGGTTTTGT ATGCTGTGGT GGTCACTGTA 
TGTGCACCTA TATGGGAAGA GATTGTGTTC CGAGGTTTCC TCCTTCCATC 
TCTAACGCGT TACATGCCAC TTCCATGGTC AATCCTGGTA AGCGCTGCAG 
CTTTTGCACT GGCACACTTC AATGCACAGA GGGTTATGCC TTTGGTTTTT 
CTTGGTGTTG TGATGGGAGG GGTCTTTGCA AGATCACGCA ACTTGTTGGC 
GTCAATGGTG TTGCACAGCC TATGGAACGG TTTTGTGTTC TTGGATTTGA 
TGAAGTGAGC TATTCTGGTG GGACTGCAAC TTCGGGCACC TGAGACAAGT 
TCTACTAAGA CTATGTTTTG CGTCTTTCGT GGAGATGATG AAGACCAGTC 
TATTCAGGAC ACAGGGGACA CAAGGTGGTA GTCAGATTTT TGTGGAGAAA 
TTGTGTAGAG TAAAGAGAAA AGAGCAGTTT GTTGGCGCGC TAGTGCAGGA 
GGAATAGTCT TTAGGGTGTT ATTCCTTGGC CTGAGGCCCA GAAGCGTCTT 
TGTTGCTTTC GTGTAAATTA CATACGCATG AGAATAATTG TCTCATCGTG 
TATAGATTTC CCATTTCGTA TTAAATTGTG TATTCGTTTC CCCTAGTGTG 
GGCTCTGGAA AATAAATTCA TTTAGCAAGA CGGCCACTAT GCATTCGACC 
GATTCTTTTG CCCATTAGAT TAATAAGCTG TAGTGATTCT AAATTCAGAG 
AAAACTATCA GTATTATGTG TTGAGATGCT TTGAGCGATG TTATGTATCT 
AAACGTGAAT GAGCATTGGT GGTGTTCTGC ATATCTCGTG TGAGTTGTAA 
AAATCCAGGA GAATGCCTCG ATCGATGGAA TATTATTTTC ATGGCTCTCT 
T

Gene models with high sequence identity

AT5G60750.1 [+] show detail - CAAX amino terminal protease family protein
E-value: 6e-73; Score: 272.00

InterPro Scan Digest

See the detailed result >

AT5G60750.1

Model type: Protein coding
Short Description: CAAX amino terminal protease family protein
Computational Description: CAAX amino terminal protease family protein; FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Abortive infection protein (InterPro:IPR003675); BEST Arabidopsis thaliana protein match is: CAAX amino terminal protease family protein (TAIR:AT1G14270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR