K01140

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01140

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Adult plant::Plant height::short)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • increased width (PATO:0000600)
    (Rosette leaf::Shape::wide)
  • upturned (PATO:0002031)
    (Rosette leaf::Shape::hyponastic)
fruit (PO:0009001)
  • decreased length (PATO:0000574)
    (Silique::Shape::short)
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01140

Determination of introduced cDNA(s)

  • J023100F02 - Rice Full-length cDNAs - Original: J023100F02

    full reading [+] show sequence

    Nucleotide sequence: J023100F02 - full reading
    GATTCCCCTT CCTCATCTCC GCCTCGCCTC CACCGGCCGT GATCTCGCCG 
    CCGGCGCCGC CCCGCCGCCC CTGAGGCCTA CTAGTAGCGA CCTACAAGTA
    CCCTGTTTTG TACCATCCTA GGAGCGAATC CTCCCCCTGC GGCAGCGGTA
    GCAGATCGCG ATGGCCGCCT CGGCGCCTCC TCCGGCGGCG ACGAATCCAC
    CGGCTTCGAC CGCGCCCACG GAGGACGGGG AGGTGGAGGA GGGTGCCACG
    CCACCGAGAA CTTCTGCGTT GGGGACGGCG AACTGGGGTA CCGCCACCCT
    CGTCGGCGTC TTCGCCGGGC TGCTCTACGG CGGGAGCAAG GAGGCCAGCG
    CCTCTGTCAG CAAAGACGCT GAAGTGATGT TGAAGATGGG GAGCACCACA
    GACAAGCGTG AGCAGTATAG ATTGATGAGA GATGCAATGG AGAAAAGATT
    CATCCGGGTT GCCAAAGGAT CGCTAGTTGG TGGTGTTCGC CTTGGGATGT
    TTACTGCAAC TTTCTTTGGC ATACAGAACC TTCTTATTGA GAAACGTGGG
    GTGCATGATG TATTTAATAT AGCTGGAGCT GGCTCGGCTA CTGCAGCTGC
    ATTTGGACTT ATATTGCCAG GTTCACCAAT GTGGCGTGCA AGGAATGTAT
    TGGTTGGATC AGCTCTTGGT GCTGGAGTCT GCTTTCCCCT TGGTTGGATA
    CAGTTGAAGC TGGCAGAGAA AGCCAATCTT GAGATGGCAA GTTCGAAACC
    AACAGATTTG GTGGAGGAAC AAGGTAATCA AAGCGGCGTT GGTGCCGCTA
    TAGAACGACT TGGGCGCAGC CTAAAGAAGT AAAAATTTGG ACCATCGAAG
    GACCTTTTTT TTTCTCATAA TCTGTGTGCG TTCCTGAAGA CCGCAGGAGG
    AACCTGTTTC ATGGGCTGCA CTACTTCAAT TTTTTCTTCT TTCATGTGCC
    TCACGCTGTA GTGCTGTCAA ACTTTGAAGC AGTAACAGCA AGGGCCACAC
    GGAGCCTCCG TTGTGGGGGA AAAAAGAGCA TTTTTGATAA AAATATCGTA
    TTCGTTGGAT GTG

    Gene models with high sequence identity

    1. AT5G63000.1 [+] show detail - Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
      E-value: 5e-66; Score: 248.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G63000.1

    Model type
    Protein coding
    Short Description
    Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
    Computational Description
    Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: protein transport; LOCATED IN: mitochondrial inner membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial inner membrane translocase complex, subunit Tim17/22 (InterPro:IPR003397); Has 40 Blast hits to 40 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR