K01144

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K01144

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K01144

Determination of introduced cDNA(s)

  • J033058C01 - Rice Full-length cDNAs - Original: J033058C01

    full reading [+] show sequence

    Nucleotide sequence: J033058C01 - full reading 
    GACTGCTTGC TTTCCTCCTC TCTCTCTCTC CCCCTTCGCC GTAGACGCGA 
    ACGCCGCGGC GGCGAGAAGG TCACGGCGAG GGGAGCTCGT GTCGAGGCGA 
    GGCGAGGTGG GGGTTGATTA TGCCCGAGGG GGGGATACCG GCATGCTTCC 
    GCGGCGCGCC GGGAGGGGGC GCGGGAGGGG GCGGTGGCGG TGGCGTGGGC 
    GTGGCGGGGC AGTCGTCAGG GGGCGTGGGG ACTAGCCTGG CGACGTCGGT 
    GTACGAGACG CGGCTCGGGG TTGCGGCGCT GTCGTGGTCG CGCGCGGCGC 
    TCGGGCTCAG CCTCCGTGTC GTGCTCCGCG TGGCGGGCGG GGCGGGGGCG 
    GGGGCGTGGG CCGCGGCGTC GTCCTCGGCG GCGTCGGATT ACGGGTGCTA 
    CGACGAGGGG GCGGGAGCAC GTGTCGATGC GCGACGCGGG GCACGGCCGC 
    GGCCACAAGA CCTTCGTCAA CGTCCGCGGC AAGGAACGGG AGATCTCGGT 
    GGATCTCGTG TCGCGCGGCC ACGGCAAGGA CAGGGACAAG GACAAGGACA 
    AGGAGAGGGA CAAGGCCGAC GTCGGCATGT CGGTCACCGT CGACGGCGAG 
    CGCGTGCTCC ACATCCGGCG CCTGCGCTGG AAGTTCCGCG GCACCGAGAA 
    GGTCGACCTC GGCGGCGGCG ACGGCGTCCA GGTCTCCTGG GACCTCCACC 
    ACTGGCTCTT CCCCAACCGC GACACGGCCC CCGCCGACGC CTCCGCGGTC 
    ACCCCGCCTC CCCAGCCCGC CCACGCCGTC TTCATCTTCC GCTTCGAGCT 
    CGCCGACATC GCCGGCGACG ACCGCGACTC TGCCGAGGTC AAGGACGAGC 
    ACCTCCTCGA AAACGCCGGG AGCGGCGGCG GCGGCGGCGC GTGGGCAGGC 
    TACCTCGGGA GGTGGGGGCG AGGGGACTGG AGCGAGAGCA GCAGCAACGG 
    GGAGAACCGG AGGAAGAGGG GGCAAGCCCG GAGGCTGGCC AAGGCGAGCT 
    CGTCGTCATC GGCGTCGGTG GCTTCCTCCT CCGCGTCGTG GGCGAGCGGC 
    TCGACGGTGA TGGACTGGGC GAGCCCCGAG GAGGCCGAGC TGCAGCGCGG 
    CCATGGCTTC TCCCTCCTCG TCTACGCCTG GAAATGCTAG CAATTGGCGC 
    CGAGCAAAGC ATTCTTTCCA TTGATGATGA TTGATGGTAA TTCAGTGAGA 
    TTTTTTCTTC TTCTTCTTCT TCTATCTTCT TCGGATTGTT GTAAGTTGCA 
    ATTGTTATCC GAGCAATGTT CTTGTGCAGT TTTTG

    Gene models with high sequence identity

    1. AT5G11000.1 [+] show detail - Plant protein of unknown function (DUF868)
      E-value: 0.00000000000004; Score: 76.30

     

    InterPro Scan Digest

    See the detailed result >

    AT5G11000.1

    Model type
    Protein coding
    Short Description
    Plant protein of unknown function (DUF868)
    Computational Description
    Plant protein of unknown function (DUF868); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF868, plant (InterPro:IPR008586); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF868) (TAIR:AT2G25200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR